Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 ABHD17AP1-201ENST00000358206 933 ntBASIC18.48■□□□□ 0.55
KRT78Q8N1N4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 KSR1P1-201ENST00000446298 240 ntBASIC18.48■□□□□ 0.55
KRT78Q8N1N4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT78Q8N1N4 AL135905.2-201ENST00000584934 1404 ntBASIC18.48■□□□□ 0.55
KRT78Q8N1N4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 AL158047.1-201ENST00000445918 881 ntBASIC18.47■□□□□ 0.55
KRT78Q8N1N4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 UBE2SP1-201ENST00000450587 669 ntBASIC18.47■□□□□ 0.55
KRT78Q8N1N4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT78Q8N1N4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 BCL2-203ENST00000589955 5011 ntBASIC18.46■□□□□ 0.55
KRT78Q8N1N4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 GCSHP5-201ENST00000443090 522 ntBASIC18.46■□□□□ 0.55
KRT78Q8N1N4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 AC090340.1-201ENST00000620778 4980 ntBASIC18.46■□□□□ 0.55
KRT78Q8N1N4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
KRT78Q8N1N4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.46■□□□□ 0.54
KRT78Q8N1N4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT78Q8N1N4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms