Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
PCDHB9Q9Y5E1 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
PCDHB9Q9Y5E1 AC008758.3-201ENST00000507003 1829 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 DNM1P47-203ENST00000571780 12667 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 RNVU1-3-201ENST00000364313 161 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 SMIM11P1-201ENST00000369586 178 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 RNU6-637P-201ENST00000384050 107 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 Z99755.1-201ENST00000414048 380 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AL356968.1-201ENST00000416622 474 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AC023141.9-201ENST00000458734 412 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 RN7SL284P-201ENST00000498823 275 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 RNU2-69P-201ENST00000516061 100 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 IGLVIV-53-201ENST00000520107 367 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 RPL23AP84-201ENST00000571193 464 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AC068768.2-201ENST00000602352 343 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AC123786.2-201ENST00000603459 275 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AL670379.4-201ENST00000605279 254 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AC078938.1-201ENST00000620993 318 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AP001784.1-201ENST00000624107 428 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 AC067931.1-201ENST00000624190 671 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB9Q9Y5E1 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 SAMMSON-210ENST00000641260 1308 ntBASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB9Q9Y5E1 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RNU6-874P-201ENST00000362390 105 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 SNORD62.1-201ENST00000362541 86 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RNU6-266P-201ENST00000364225 107 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RNU105B-201ENST00000364478 208 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 Y_RNA.380-201ENST00000365663 111 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RHOT1P2-201ENST00000366423 333 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 Y_RNA.447-201ENST00000384184 113 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RNU6-434P-201ENST00000384376 107 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 Y_RNA.552-201ENST00000384665 112 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 MIR143-201ENST00000385300 106 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RN7SKP151-201ENST00000410230 316 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RNU4-64P-201ENST00000410795 131 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RPL21P24-201ENST00000413752 448 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 HMGA1P8-201ENST00000414130 321 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 SDHDP6-201ENST00000414693 480 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 AC243428.1-201ENST00000421099 264 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RPL21P109-201ENST00000422213 475 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 MTND2P29-201ENST00000438595 412 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 FTLP8-201ENST00000446770 267 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RPS3AP41-201ENST00000462701 778 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 CEACAMP10-202ENST00000495431 496 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RNU6-408P-201ENST00000515910 100 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RNU6-120P-201ENST00000516077 103 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RNU6-1143P-201ENST00000516125 104 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RNA5SP438-201ENST00000516561 112 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 RNA5SP384-201ENST00000516615 116 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 HMGN1P28-201ENST00000521340 364 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 AP001922.4-201ENST00000526967 290 ntBASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHB9Q9Y5E1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms