RNA–Protein interactions for RNA: ENST00000414130.1

HMGA1P8-201, Transcript of high mobility group AT-hook 1 pseudogene 8, humanhuman

BASIC

Gene HMGA1P8, Length 321 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P8-201ENST00000414130 NISCHQ9Y2I1 1504 aa13.5□□□□□ -0.25
HMGA1P8-201ENST00000414130 CCDC180Q9P1Z9 1646 aa12.19□□□□□ -0.46
HMGA1P8-201ENST00000414130 ABCC9O60706 1549 aa12.1□□□□□ -0.47
HMGA1P8-201ENST00000414130 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
HMGA1P8-201ENST00000414130 NACADO15069 1562 aa11.54□□□□□ -0.56
HMGA1P8-201ENST00000414130 MYO15BQ96JP2 1530 aa11.4□□□□□ -0.58
HMGA1P8-201ENST00000414130 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
HMGA1P8-201ENST00000414130 DNAJC5BQ9UF47 199 aa11.26□□□□□ -0.61
HMGA1P8-201ENST00000414130 DCAF1Q9Y4B6 1507 aa11.23□□□□□ -0.61
HMGA1P8-201ENST00000414130 SHROOM4Q9ULL8 1493 aa11.22□□□□□ -0.61
HMGA1P8-201ENST00000414130 UNC13AQ9UPW8 1703 aa11.21□□□□□ -0.61
HMGA1P8-201ENST00000414130 ZCCHC6Q5VYS8 1495 aaKnown RBP11.21□□□□□ -0.61
HMGA1P8-201ENST00000414130 PABPN1Q86U42 306 aaKnown RBP eCLIP11.21□□□□□ -0.61
HMGA1P8-201ENST00000414130 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
HMGA1P8-201ENST00000414130 SCRIBQ14160 1630 aa11□□□□□ -0.65
HMGA1P8-201ENST00000414130 CC2D2AQ9P2K1 1620 aa10.95□□□□□ -0.66
HMGA1P8-201ENST00000414130 CECR2Q9BXF3 1484 aa10.95□□□□□ -0.66
HMGA1P8-201ENST00000414130 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
HMGA1P8-201ENST00000414130 NCAPD3P42695 1498 aa10.62□□□□□ -0.71
HMGA1P8-201ENST00000414130 SMARCA2P51531 1590 aa10.6□□□□□ -0.71
HMGA1P8-201ENST00000414130 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
HMGA1P8-201ENST00000414130 HMGXB3Q12766 1538 aa10.56□□□□□ -0.72
HMGA1P8-201ENST00000414130 CUX2O14529 1486 aa10.55□□□□□ -0.72
HMGA1P8-201ENST00000414130 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
HMGA1P8-201ENST00000414130 ERCC6Q03468 1493 aa10.54□□□□□ -0.72
HMGA1P8-201ENST00000414130 BAZ1AQ9NRL2 1556 aaPredicted RBP10.53□□□□□ -0.72
HMGA1P8-201ENST00000414130 SMARCA4P51532 1647 aa10.53□□□□□ -0.72
HMGA1P8-201ENST00000414130 DNAJC5Q9H3Z4 198 aa10.5□□□□□ -0.73
HMGA1P8-201ENST00000414130 BAZ1BQ9UIG0 1483 aaKnown RBP10.48□□□□□ -0.73
HMGA1P8-201ENST00000414130 PEG3Q9GZU2 1588 aa10.48□□□□□ -0.73
HMGA1P8-201ENST00000414130 LAMC3Q9Y6N6 1575 aa10.41□□□□□ -0.74
HMGA1P8-201ENST00000414130 CHIC1Q5VXU3 224 aa10.41□□□□□ -0.74
HMGA1P8-201ENST00000414130 PDS5BQ9NTI5 1447 aa10.37□□□□□ -0.75
HMGA1P8-201ENST00000414130 RSF1Q96T23 1441 aaPredicted RBP10.35□□□□□ -0.75
HMGA1P8-201ENST00000414130 NESP48681 1621 aa10.34□□□□□ -0.75
HMGA1P8-201ENST00000414130 MROH2BQ7Z745 1585 aa10.34□□□□□ -0.75
HMGA1P8-201ENST00000414130 THOC2Q8NI27 1593 aaKnown RBP10.31□□□□□ -0.76
HMGA1P8-201ENST00000414130 CADPSQ9ULU8 1353 aa10.28□□□□□ -0.76
HMGA1P8-201ENST00000414130 KIF21AQ7Z4S6 1674 aa10.25□□□□□ -0.77
HMGA1P8-201ENST00000414130 MRC2Q9UBG0 1479 aa10.23□□□□□ -0.77
HMGA1P8-201ENST00000414130 CEP164Q9UPV0 1460 aa10.21□□□□□ -0.78
HMGA1P8-201ENST00000414130 WDR62O43379 1518 aa10.21□□□□□ -0.78
HMGA1P8-201ENST00000414130 WIZO95785 1651 aa10.21□□□□□ -0.78
HMGA1P8-201ENST00000414130 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
HMGA1P8-201ENST00000414130 CFTRP13569 1480 aa10.17□□□□□ -0.78
HMGA1P8-201ENST00000414130 FANCD2Q9BXW9 1451 aa10.16□□□□□ -0.78
HMGA1P8-201ENST00000414130 PRDM2Q13029 1718 aa10.07□□□□□ -0.8
HMGA1P8-201ENST00000414130 TRIM41Q8WV44 630 aa10.05□□□□□ -0.8
HMGA1P8-201ENST00000414130 OSCARQ8IYS5 282 aa10.04□□□□□ -0.8
HMGA1P8-201ENST00000414130 ABCC8Q09428 1581 aa10.04□□□□□ -0.8
HMGA1P8-201ENST00000414130 URB2Q14146 1524 aaKnown RBP10.02□□□□□ -0.8
HMGA1P8-201ENST00000414130 IFT140Q96RY7 1462 aa10.01□□□□□ -0.81
HMGA1P8-201ENST00000414130 EEA1Q15075 1411 aa9.99□□□□□ -0.81
HMGA1P8-201ENST00000414130 CCDC88BA6NC98 1476 aa9.99□□□□□ -0.81
HMGA1P8-201ENST00000414130 HRCP23327 699 aa9.98□□□□□ -0.81
HMGA1P8-201ENST00000414130 TRIM26Q12899 539 aaPredicted RBP9.95□□□□□ -0.82
HMGA1P8-201ENST00000414130 DNMBPQ6XZF7 1577 aa9.94□□□□□ -0.82
HMGA1P8-201ENST00000414130 TOPBP1Q92547 1522 aa9.94□□□□□ -0.82
HMGA1P8-201ENST00000414130 EIF4G3O43432 1585 aaKnown RBP9.89□□□□□ -0.83
HMGA1P8-201ENST00000414130 ZEB1P37275 1124 aaPredicted RBP9.89□□□□□ -0.83
HMGA1P8-201ENST00000414130 WDR97A6NE52 1622 aa9.89□□□□□ -0.83
HMGA1P8-201ENST00000414130 ZNF608Q9ULD9 1512 aaPredicted RBP9.88□□□□□ -0.83
HMGA1P8-201ENST00000414130 LOC105371045A0A1W2PR82 267 aa9.86□□□□□ -0.83
HMGA1P8-201ENST00000414130 PCGF6Q9BYE7 350 aa9.86□□□□□ -0.83
HMGA1P8-201ENST00000414130 RIMBP3CA6NJZ7 1639 aa9.85□□□□□ -0.83
HMGA1P8-201ENST00000414130 RIMBP3BA6NNM3 1639 aa9.85□□□□□ -0.83
HMGA1P8-201ENST00000414130 TARBP1Q13395 1621 aaKnown RBP9.85□□□□□ -0.83
HMGA1P8-201ENST00000414130 RIMBP3Q9UFD9 1639 aa9.85□□□□□ -0.83
HMGA1P8-201ENST00000414130 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
HMGA1P8-201ENST00000414130 ARHGEF11O15085 1522 aa9.84□□□□□ -0.83
HMGA1P8-201ENST00000414130 SOGA1O94964 1423 aa9.82□□□□□ -0.84
HMGA1P8-201ENST00000414130 WRNQ14191 1432 aaPredicted RBP eCLIP9.82□□□□□ -0.84
HMGA1P8-201ENST00000414130 AQRO60306 1485 aaKnown RBP eCLIP9.8□□□□□ -0.84
HMGA1P8-201ENST00000414130 CHD1O14646 1710 aa9.79□□□□□ -0.84
HMGA1P8-201ENST00000414130 MAGI1Q96QZ7 1491 aaPredicted RBP9.79□□□□□ -0.84
HMGA1P8-201ENST00000414130 TNIKQ9UKE5 1360 aa9.78□□□□□ -0.84
HMGA1P8-201ENST00000414130 FBLN2P98095 1184 aa9.78□□□□□ -0.84
HMGA1P8-201ENST00000414130 FGD5Q6ZNL6 1462 aa9.78□□□□□ -0.84
HMGA1P8-201ENST00000414130 GRIN2BQ13224 1484 aa9.77□□□□□ -0.85
HMGA1P8-201ENST00000414130 SYNJ1O43426 1573 aa9.76□□□□□ -0.85
HMGA1P8-201ENST00000414130 CHMP7Q8WUX9 453 aaPredicted RBP9.75□□□□□ -0.85
HMGA1P8-201ENST00000414130 TDRD9Q8NDG6 1382 aaKnown RBP9.75□□□□□ -0.85
HMGA1P8-201ENST00000414130 SNAPC4Q5SXM2 1469 aa9.74□□□□□ -0.85
HMGA1P8-201ENST00000414130 RAD54L2Q9Y4B4 1467 aa9.74□□□□□ -0.85
HMGA1P8-201ENST00000414130 CYB5RLQ6IPT4 315 aa9.74□□□□□ -0.85
HMGA1P8-201ENST00000414130 SYNJ2O15056 1496 aa9.73□□□□□ -0.85
HMGA1P8-201ENST00000414130 GOLGA3Q08378 1498 aa9.73□□□□□ -0.85
HMGA1P8-201ENST00000414130 CUX1P39880 1505 aa9.73□□□□□ -0.85
HMGA1P8-201ENST00000414130 KIF21BO75037 1637 aa9.72□□□□□ -0.85
HMGA1P8-201ENST00000414130 CSRNP3Q8WYN3 585 aa9.71□□□□□ -0.86
HMGA1P8-201ENST00000414130 ARAP1Q96P48 1450 aa9.71□□□□□ -0.86
HMGA1P8-201ENST00000414130 CLASP1Q7Z460 1538 aa9.71□□□□□ -0.86
HMGA1P8-201ENST00000414130 GAPVD1Q14C86 1478 aa9.7□□□□□ -0.86
HMGA1P8-201ENST00000414130 ABCA10Q8WWZ4 1543 aa9.7□□□□□ -0.86
HMGA1P8-201ENST00000414130 CEP162Q5TB80 1403 aa9.68□□□□□ -0.86
HMGA1P8-201ENST00000414130 TRHP20396 242 aaPredicted RBP9.68□□□□□ -0.86
HMGA1P8-201ENST00000414130 FAM9AQ8IZU1 332 aaPredicted RBP9.68□□□□□ -0.86
HMGA1P8-201ENST00000414130 PBRM1Q86U86 1689 aa9.67□□□□□ -0.86
HMGA1P8-201ENST00000414130 TOP2BQ02880 1626 aa9.67□□□□□ -0.86
HMGA1P8-201ENST00000414130 ABCA5Q8WWZ7 1642 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms