Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 KRT18P6-201ENST00000555540 1265 ntBASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 AL032819.2-201ENST00000624543 2162 ntBASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV1A0A0A0MS02 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 TUBB8P6-201ENST00000436895 1288 ntBASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 AC026366.1-201ENST00000488803 879 ntBASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV1A0A0A0MS02 KRT8P8-201ENST00000434750 1448 ntBASIC13.96□□□□□ -0.18
TRGV1A0A0A0MS02 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV1A0A0A0MS02 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.96□□□□□ -0.18
TRGV1A0A0A0MS02 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
TRGV1A0A0A0MS02 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.96□□□□□ -0.18
TRGV1A0A0A0MS02 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV1A0A0A0MS02 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV1A0A0A0MS02 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV1A0A0A0MS02 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 Z82202.1-201ENST00000623446 1880 ntBASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV1A0A0A0MS02 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV1A0A0A0MS02 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms