Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 RPPH1-201ENST00000516869 333 ntBASIC18.59■□□□□ 0.57
KRT78Q8N1N4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT78Q8N1N4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
KRT78Q8N1N4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
KRT78Q8N1N4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.58■□□□□ 0.57
KRT78Q8N1N4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRT78Q8N1N4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.58■□□□□ 0.57
KRT78Q8N1N4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRT78Q8N1N4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.58■□□□□ 0.57
KRT78Q8N1N4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRT78Q8N1N4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.58■□□□□ 0.57
KRT78Q8N1N4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.58■□□□□ 0.57
KRT78Q8N1N4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 FAM197Y4-202ENST00000622692 608 ntBASIC18.58■□□□□ 0.56
KRT78Q8N1N4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KRT78Q8N1N4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
KRT78Q8N1N4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms