Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 HTR7P1-202ENST00000624664 4411 ntBASIC16.82■□□□□ 0.28
SFTPBP07988 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SFTPBP07988 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SFTPBP07988 AP001271.2-201ENST00000624018 1556 ntBASIC16.81■□□□□ 0.28
SFTPBP07988 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.81■□□□□ 0.28
SFTPBP07988 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 AC005332.7-201ENST00000614046 2005 ntBASIC16.81■□□□□ 0.28
SFTPBP07988 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SFTPBP07988 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SFTPBP07988 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.81■□□□□ 0.28
SFTPBP07988 AC023632.3-201ENST00000521633 145 ntBASIC16.81■□□□□ 0.28
SFTPBP07988 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.81■□□□□ 0.28
SFTPBP07988 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SFTPBP07988 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.81■□□□□ 0.28
SFTPBP07988 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SFTPBP07988 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFTPBP07988 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SFTPBP07988 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.8■□□□□ 0.28
SFTPBP07988 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.8■□□□□ 0.28
SFTPBP07988 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.8■□□□□ 0.28
SFTPBP07988 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.8■□□□□ 0.28
SFTPBP07988 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.8■□□□□ 0.28
SFTPBP07988 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.8■□□□□ 0.28
SFTPBP07988 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.8■□□□□ 0.28
SFTPBP07988 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.8■□□□□ 0.28
SFTPBP07988 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SFTPBP07988 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SFTPBP07988 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.79■□□□□ 0.28
SFTPBP07988 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.79■□□□□ 0.28
SFTPBP07988 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 PHGDH-210ENST00000641115 1638 ntBASIC16.79■□□□□ 0.28
SFTPBP07988 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.79■□□□□ 0.28
SFTPBP07988 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.79■□□□□ 0.28
SFTPBP07988 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.79■□□□□ 0.28
SFTPBP07988 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SFTPBP07988 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.79■□□□□ 0.28
SFTPBP07988 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.79■□□□□ 0.28
SFTPBP07988 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFTPBP07988 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SFTPBP07988 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.78■□□□□ 0.28
SFTPBP07988 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.78■□□□□ 0.28
SFTPBP07988 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SFTPBP07988 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFTPBP07988 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.78■□□□□ 0.28
SFTPBP07988 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.78■□□□□ 0.28
SFTPBP07988 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms