Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 TREX1-205ENST00000625293 1783 ntBASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 AC142086.2-201ENST00000569753 217 ntBASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 SOX15-203ENST00000570788 1093 ntBASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 AC116562.4-201ENST00000641316 2276 ntBASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRGV1A0A0A0MS02 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 ID1-201ENST00000376105 1233 ntBASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 AL121906.2-201ENST00000621597 723 ntBASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRGV1A0A0A0MS02 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRGV1A0A0A0MS02 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.08□□□□□ -0.15
TRGV1A0A0A0MS02 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRGV1A0A0A0MS02 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
TRGV1A0A0A0MS02 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms