Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.02■□□□□ 0.31
CDH20Q9HBT6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH20Q9HBT6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH20Q9HBT6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH20Q9HBT6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDH20Q9HBT6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDH20Q9HBT6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CDH20Q9HBT6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 AL158047.1-201ENST00000445918 881 ntBASIC17.01■□□□□ 0.31
CDH20Q9HBT6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 AC124016.1-201ENST00000609552 612 ntBASIC17.01■□□□□ 0.31
CDH20Q9HBT6 AC110285.5-201ENST00000611501 352 ntBASIC17.01■□□□□ 0.31
CDH20Q9HBT6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.01■□□□□ 0.31
CDH20Q9HBT6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDH20Q9HBT6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17■□□□□ 0.31
CDH20Q9HBT6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17■□□□□ 0.31
CDH20Q9HBT6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17■□□□□ 0.31
CDH20Q9HBT6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17■□□□□ 0.31
CDH20Q9HBT6 TUBB8P6-201ENST00000436895 1288 ntBASIC17■□□□□ 0.31
CDH20Q9HBT6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17■□□□□ 0.31
CDH20Q9HBT6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17■□□□□ 0.31
CDH20Q9HBT6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDH20Q9HBT6 AL359736.2-201ENST00000621992 437 ntBASIC17■□□□□ 0.31
CDH20Q9HBT6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH20Q9HBT6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CDH20Q9HBT6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17■□□□□ 0.31
CDH20Q9HBT6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17■□□□□ 0.31
CDH20Q9HBT6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH20Q9HBT6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 AC133681.1-201ENST00000465482 601 ntBASIC16.99■□□□□ 0.31
CDH20Q9HBT6 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH20Q9HBT6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms