Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 COQ8A-206ENST00000479852 1938 ntTSL 1 (best)22.93■■□□□ 1.261e-6■■■□□ 17.3
DDX42Q86XP3 SLC6A8-210ENST00000485324 2401 ntTSL 222.12■■□□□ 1.132e-6■■■□□ 17.3
DDX42Q86XP3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.931e-6■■■□□ 17.3
DDX42Q86XP3 RNF44-207ENST00000513029 1647 ntTSL 218.66■□□□□ 0.581e-6■■■□□ 17.3
DDX42Q86XP3 RNF44-204ENST00000506378 848 ntTSL 218.3■□□□□ 0.521e-6■■■□□ 17.3
DDX42Q86XP3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.361e-6■■■□□ 17.3
DDX42Q86XP3 COQ8A-207ENST00000485462 2141 ntTSL 1 (best)17■□□□□ 0.311e-6■■■□□ 17.3
DDX42Q86XP3 FASN-207ENST00000635197 627 ntTSL 316.95■□□□□ 0.31e-6■■■□□ 17.3
DDX42Q86XP3 SUN1-207ENST00000419312 473 ntTSL 416.88■□□□□ 0.291e-6■■■□□ 17.3
DDX42Q86XP3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.82■□□□□ 0.282e-6■■■□□ 17.3
DDX42Q86XP3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.061e-6■■■□□ 17.3
DDX42Q86XP3 SUN1-201ENST00000340926 2128 ntTSL 515.34■□□□□ 0.051e-6■■■□□ 17.3
DDX42Q86XP3 SUN1-218ENST00000450881 513 ntTSL 415.24■□□□□ 0.031e-6■■■□□ 17.3
DDX42Q86XP3 SUN1-234ENST00000493681 526 ntTSL 313.1□□□□□ -0.311e-6■■■□□ 17.3
DDX42Q86XP3 RNF44-208ENST00000515051 596 ntTSL 412.78□□□□□ -0.361e-6■■■□□ 17.3
DDX42Q86XP3 SUN1-212ENST00000429178 3701 ntTSL 1 (best)12.12□□□□□ -0.471e-6■■■□□ 17.3
DDX42Q86XP3 SUN1-206ENST00000413171 4488 ntTSL 511.92□□□□□ -0.51e-6■■■□□ 17.3
DDX42Q86XP3 H3F3A-203ENST00000366815 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.531e-6■■■□□ 17.3
DDX42Q86XP3 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.611e-6■■■□□ 17.3
DDX42Q86XP3 DAZAP1-206ENST00000587833 560 ntTSL 510.96□□□□□ -0.651e-6■■■□□ 17.3
DDX42Q86XP3 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC10.88□□□□□ -0.671e-6■■■□□ 17.3
DDX42Q86XP3 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.731e-6■■■□□ 17.3
DDX42Q86XP3 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.781e-6■■■□□ 17.3
DDX42Q86XP3 TRIM25-203ENST00000570473 498 ntTSL 39.9□□□□□ -0.821e-6■■■□□ 17.3
DDX42Q86XP3 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC9.89□□□□□ -0.831e-6■■■□□ 17.3
DDX42Q86XP3 FASN-213ENST00000637693 100 ntTSL 59.86□□□□□ -0.831e-6■■■□□ 17.3
DDX42Q86XP3 NPM1-208ENST00000521672 597 ntTSL 58.66□□□□□ -1.021e-6■■■□□ 17.3
DDX42Q86XP3 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.031e-6■■■□□ 17.3
DDX42Q86XP3 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.071e-6■■■□□ 17.3
DDX42Q86XP3 NPM1-205ENST00000518587 670 ntTSL 26.68□□□□□ -1.341e-6■■■□□ 17.3
DDX42Q86XP3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.59□□□□□ -1.351e-6■■■□□ 17.3
DDX42Q86XP3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.38□□□□□ -1.391e-6■■■□□ 17.3
DDX42Q86XP3 SUN1-228ENST00000471349 569 ntTSL 44.9□□□□□ -1.631e-6■■■□□ 17.3
DDX42Q86XP3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.13e-6■■■□□ 17.2
DDX42Q86XP3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.013e-6■■■□□ 17.2
DDX42Q86XP3 STIM2-209ENST00000494628 726 ntTSL 515.07■□□□□ 03e-11■■■□□ 17.2
DDX42Q86XP3 AARS-207ENST00000569825 871 ntTSL 217.95■□□□□ 0.462e-6■■■□□ 16.9
DDX42Q86XP3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.463e-9■■■□□ 16.9
DDX42Q86XP3 SRRM2-220ENST00000574593 1440 ntTSL 316.69■□□□□ 0.263e-9■■■□□ 16.9
DDX42Q86XP3 SRRM2-213ENST00000573311 732 ntTSL 215.72■□□□□ 0.113e-9■■■□□ 16.9
DDX42Q86XP3 MYL6-216ENST00000550184 1564 ntTSL 515.41■□□□□ 0.063e-9■■■□□ 16.9
DDX42Q86XP3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.033e-9■■■□□ 16.9
DDX42Q86XP3 SRRM2-210ENST00000572721 841 ntTSL 214.86□□□□□ -0.033e-9■■■□□ 16.9
DDX42Q86XP3 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.123e-9■■■□□ 16.9
DDX42Q86XP3 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.153e-9■■■□□ 16.9
DDX42Q86XP3 MYL6-210ENST00000548400 573 ntTSL 3 BASIC13.54□□□□□ -0.243e-9■■■□□ 16.9
DDX42Q86XP3 MYL6-215ENST00000549566 685 ntTSL 2 BASIC13.45□□□□□ -0.263e-9■■■□□ 16.9
DDX42Q86XP3 MVD-202ENST00000561895 499 ntTSL 213.34□□□□□ -0.276e-10■■■□□ 16.9
DDX42Q86XP3 SRRM2-211ENST00000572883 887 ntTSL 211.17□□□□□ -0.623e-9■■■□□ 16.9
DDX42Q86XP3 MYL6-206ENST00000547408 683 ntTSL 3 BASIC9.97□□□□□ -0.813e-9■■■□□ 16.9
DDX42Q86XP3 MYL6-205ENST00000546845 452 ntTSL 39.65□□□□□ -0.863e-9■■■□□ 16.9
DDX42Q86XP3 EIF2AK1-209ENST00000490523 905 ntTSL 29.45□□□□□ -0.93e-9■■■□□ 16.9
DDX42Q86XP3 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.923e-9■■■□□ 16.9
DDX42Q86XP3 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.043e-9■■■□□ 16.9
DDX42Q86XP3 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.65□□□□□ -1.183e-9■■■□□ 16.9
DDX42Q86XP3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.1□□□□□ -1.433e-9■■■□□ 16.9
DDX42Q86XP3 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)14.14□□□□□ -0.155e-7■■■□□ 16.8
DDX42Q86XP3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.12e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.882e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-224ENST00000568435 935 ntTSL 1 (best)17.79■□□□□ 0.442e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.372e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.23■□□□□ 0.352e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-223ENST00000567555 554 ntTSL 1 (best)16.58■□□□□ 0.242e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.192e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.2■□□□□ 0.182e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.162e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.092e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-211ENST00000564521 2534 ntTSL 514.54□□□□□ -0.082e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.12e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.12e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-216ENST00000566012 553 ntTSL 514.4□□□□□ -0.12e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC14.12□□□□□ -0.152e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-220ENST00000566846 512 ntTSL 212.36□□□□□ -0.432e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-210ENST00000563987 586 ntTSL 211.5□□□□□ -0.572e-13■■■□□ 16.6
DDX42Q86XP3 ALDOA-205ENST00000562168 666 ntTSL 311.07□□□□□ -0.642e-13■■■□□ 16.6
DDX42Q86XP3 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.323e-6■■■□□ 16.6
DDX42Q86XP3 ZNF251-204ENST00000530353 2342 ntTSL 224.89■■□□□ 1.587e-6■■■□□ 16.5
DDX42Q86XP3 TRAF4-211ENST00000478021 718 ntTSL 323.95■■□□□ 1.423e-8■■■□□ 16.5
DDX42Q86XP3 TRAF4-207ENST00000461195 787 ntTSL 223.74■■□□□ 1.393e-8■■■□□ 16.5
DDX42Q86XP3 TRAF4-204ENST00000422344 631 ntTSL 323.14■■□□□ 1.293e-8■■■□□ 16.5
DDX42Q86XP3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.12■■□□□ 1.293e-8■■■□□ 16.5
DDX42Q86XP3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.94■■□□□ 1.263e-8■■■□□ 16.5
DDX42Q86XP3 PPT2-EGFL8-207ENST00000585246 1051 ntAPPRIS ALT2 TSL 222.62■■□□□ 1.217e-6■■■□□ 16.5
DDX42Q86XP3 TRAF4-203ENST00000394925 702 ntTSL 222.48■■□□□ 1.193e-8■■■□□ 16.5
DDX42Q86XP3 TRAF4-216ENST00000586813 789 ntTSL 320.58■□□□□ 0.893e-8■■■□□ 16.5
DDX42Q86XP3 TMC6-204ENST00000585849 552 ntTSL 220.35■□□□□ 0.857e-6■■■□□ 16.5
DDX42Q86XP3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.817e-6■■■□□ 16.5
DDX42Q86XP3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.763e-8■■■□□ 16.5
DDX42Q86XP3 PPT2-EGFL8-201ENST00000421600 999 ntAPPRIS ALT2 TSL 519.51■□□□□ 0.717e-6■■■□□ 16.5
DDX42Q86XP3 EGFL7-207ENST00000492862 723 ntTSL 519.1■□□□□ 0.653e-8■■■□□ 16.5
DDX42Q86XP3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.647e-6■■■□□ 16.5
DDX42Q86XP3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.627e-6■■■□□ 16.5
DDX42Q86XP3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.67e-6■■■□□ 16.5
DDX42Q86XP3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.547e-6■■■□□ 16.5
DDX42Q86XP3 PPT2-EGFL8-206ENST00000583227 1540 ntAPPRIS ALT2 TSL 518.32■□□□□ 0.527e-6■■■□□ 16.5
DDX42Q86XP3 EGFL7-205ENST00000490469 456 ntTSL 517.99■□□□□ 0.473e-8■■■□□ 16.5
DDX42Q86XP3 PPT2-EGFL8-204ENST00000453656 1327 ntTSL 217.95■□□□□ 0.467e-6■■■□□ 16.5
DDX42Q86XP3 TPCN1-219ENST00000552077 3293 ntTSL 217.78■□□□□ 0.447e-6■■■□□ 16.5
DDX42Q86XP3 PPT2-EGFL8-203ENST00000428388 2878 ntAPPRIS P5 TSL 217.57■□□□□ 0.47e-6■■■□□ 16.5
DDX42Q86XP3 TMC6-222ENST00000592076 693 ntTSL 317.19■□□□□ 0.347e-6■■■□□ 16.5
Retrieved 100 of 2,477 protein–RNA pairs in 206.2 ms