RNA–Protein interactions for RNA: ENST00000552077.5

TPCN1-219, Transcript of two pore segment channel 1, humanhuman

TSL 2

Gene TPCN1, Length 3,293 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-219ENST00000552077 NISCHQ9Y2I1 1504 aa30.92■■■□□ 2.54
TPCN1-219ENST00000552077 SHROOM4Q9ULL8 1493 aa27.49■■□□□ 1.99
TPCN1-219ENST00000552077 SUPT5HO00267 1087 aaKnown RBP27.32■■□□□ 1.96
TPCN1-219ENST00000552077 HRCP23327 699 aa27.1■■□□□ 1.93
TPCN1-219ENST00000552077 PCGF6Q9BYE7 350 aa26.8■■□□□ 1.88
TPCN1-219ENST00000552077 MYO15BQ96JP2 1530 aa26.73■■□□□ 1.87
TPCN1-219ENST00000552077 PPARGC1BQ86YN6 1023 aaKnown RBP26.69■■□□□ 1.86
TPCN1-219ENST00000552077 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
TPCN1-219ENST00000552077 ZCCHC6Q5VYS8 1495 aaKnown RBP26.25■■□□□ 1.79
TPCN1-219ENST00000552077 DCAF8L2P0C7V8 631 aa26.15■■□□□ 1.78
TPCN1-219ENST00000552077 LOC105371045A0A1W2PR82 267 aa26.13■■□□□ 1.77
TPCN1-219ENST00000552077 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
TPCN1-219ENST00000552077 TRIM26Q12899 539 aaPredicted RBP25.88■■□□□ 1.73
TPCN1-219ENST00000552077 PELP1Q8IZL8 1130 aaKnown RBP25.68■■□□□ 1.7
TPCN1-219ENST00000552077 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
TPCN1-219ENST00000552077 ZEB1P37275 1124 aaPredicted RBP25.54■■□□□ 1.68
TPCN1-219ENST00000552077 SCAF1Q9H7N4 1312 aaKnown RBP25.53■■□□□ 1.68
TPCN1-219ENST00000552077 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
TPCN1-219ENST00000552077 EHMT2Q96KQ7 1210 aa25.29■■□□□ 1.64
TPCN1-219ENST00000552077 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
TPCN1-219ENST00000552077 ACIN1Q9UKV3 1341 aaKnown RBP24.97■■□□□ 1.59
TPCN1-219ENST00000552077 NEUROD1Q13562 356 aa24.96■■□□□ 1.59
TPCN1-219ENST00000552077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
TPCN1-219ENST00000552077 ABCC9O60706 1549 aa24.89■■□□□ 1.57
TPCN1-219ENST00000552077 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
TPCN1-219ENST00000552077 CCER1Q8TC90 406 aaPredicted RBP24.86■■□□□ 1.57
TPCN1-219ENST00000552077 GTF3C3Q9Y5Q9 886 aa24.82■■□□□ 1.56
TPCN1-219ENST00000552077 RB1CC1Q8TDY2 1594 aa24.74■■□□□ 1.55
TPCN1-219ENST00000552077 DIEXFQ68CQ4 756 aaKnown RBP24.73■■□□□ 1.55
TPCN1-219ENST00000552077 CENPBP07199 599 aaPredicted RBP24.71■■□□□ 1.55
TPCN1-219ENST00000552077 TTBK1Q5TCY1 1321 aaPredicted RBP24.63■■□□□ 1.53
TPCN1-219ENST00000552077 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
TPCN1-219ENST00000552077 MYT1Q01538 1121 aa24.55■■□□□ 1.52
TPCN1-219ENST00000552077 YTHDC1Q96MU7 727 aaKnown RBP24.43■■□□□ 1.5
TPCN1-219ENST00000552077 CECR2Q9BXF3 1484 aa24.29■■□□□ 1.48
TPCN1-219ENST00000552077 ZNF316A6NFI3 1004 aaPredicted RBP24.27■■□□□ 1.48
TPCN1-219ENST00000552077 MROH2BQ7Z745 1585 aa24.2■■□□□ 1.47
TPCN1-219ENST00000552077 MIER1Q8N108 512 aa24.13■■□□□ 1.45
TPCN1-219ENST00000552077 WIZO95785 1651 aa24.1■■□□□ 1.45
TPCN1-219ENST00000552077 CEP162Q5TB80 1403 aa24.08■■□□□ 1.44
TPCN1-219ENST00000552077 WRNQ14191 1432 aaPredicted RBP eCLIP24.05■■□□□ 1.44
TPCN1-219ENST00000552077 UBTFP17480 764 aaKnown RBP24.01■■□□□ 1.43
TPCN1-219ENST00000552077 HNRNPUL2Q1KMD3 747 aaKnown RBP23.99■■□□□ 1.43
TPCN1-219ENST00000552077 CCDC88BA6NC98 1476 aa23.96■■□□□ 1.43
TPCN1-219ENST00000552077 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
TPCN1-219ENST00000552077 SOGA1O94964 1423 aa23.91■■□□□ 1.42
TPCN1-219ENST00000552077 TNIKQ9UKE5 1360 aa23.89■■□□□ 1.41
TPCN1-219ENST00000552077 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
TPCN1-219ENST00000552077 CSRNP3Q8WYN3 585 aa23.84■■□□□ 1.41
TPCN1-219ENST00000552077 BAZ1AQ9NRL2 1556 aaPredicted RBP23.83■■□□□ 1.41
TPCN1-219ENST00000552077 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
TPCN1-219ENST00000552077 NACADO15069 1562 aa23.69■■□□□ 1.38
TPCN1-219ENST00000552077 SUPT16HQ9Y5B9 1047 aaKnown RBP23.64■■□□□ 1.37
TPCN1-219ENST00000552077 GOLGA3Q08378 1498 aa23.62■■□□□ 1.37
TPCN1-219ENST00000552077 RANGAP1P46060 587 aaPredicted RBP23.62■■□□□ 1.37
TPCN1-219ENST00000552077 EEA1Q15075 1411 aa23.6■■□□□ 1.37
TPCN1-219ENST00000552077 APLP2Q06481 763 aa23.58■■□□□ 1.37
TPCN1-219ENST00000552077 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.37
TPCN1-219ENST00000552077 SMARCA2P51531 1590 aa23.53■■□□□ 1.36
TPCN1-219ENST00000552077 CLIP1P30622 1438 aa23.49■■□□□ 1.35
TPCN1-219ENST00000552077 TSHZ2Q9NRE2 1034 aa23.46■■□□□ 1.35
TPCN1-219ENST00000552077 CLSPNQ9HAW4 1339 aa23.44■■□□□ 1.34
TPCN1-219ENST00000552077 VPS8Q8N3P4 1428 aa23.39■■□□□ 1.34
TPCN1-219ENST00000552077 CEP164Q9UPV0 1460 aa23.39■■□□□ 1.33
TPCN1-219ENST00000552077 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
TPCN1-219ENST00000552077 ANP32EQ9BTT0 268 aa23.37■■□□□ 1.33
TPCN1-219ENST00000552077 BCANQ96GW7 911 aa23.33■■□□□ 1.32
TPCN1-219ENST00000552077 DHX57Q6P158 1386 aaKnown RBP23.32■■□□□ 1.32
TPCN1-219ENST00000552077 KCNH8Q96L42 1107 aa23.27■■□□□ 1.32
TPCN1-219ENST00000552077 RAPGEF2Q9Y4G8 1499 aa23.23■■□□□ 1.31
TPCN1-219ENST00000552077 KIF21BO75037 1637 aa23.22■■□□□ 1.31
TPCN1-219ENST00000552077 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
TPCN1-219ENST00000552077 BCL11AQ9H165 835 aa23.17■■□□□ 1.3
TPCN1-219ENST00000552077 ITGAEP38570 1179 aa23.15■■□□□ 1.3
TPCN1-219ENST00000552077 KANK4Q5T7N3 995 aaPredicted RBP23.15■■□□□ 1.3
TPCN1-219ENST00000552077 FKBP8Q14318 412 aa23.14■■□□□ 1.3
TPCN1-219ENST00000552077 BAZ1BQ9UIG0 1483 aaKnown RBP23.1■■□□□ 1.29
TPCN1-219ENST00000552077 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
TPCN1-219ENST00000552077 DDX10Q13206 875 aaKnown RBP23■■□□□ 1.27
TPCN1-219ENST00000552077 RBM19Q9Y4C8 960 aaKnown RBP22.95■■□□□ 1.27
TPCN1-219ENST00000552077 NEFLP07196 543 aa22.95■■□□□ 1.26
TPCN1-219ENST00000552077 ARAP1Q96P48 1450 aa22.93■■□□□ 1.26
TPCN1-219ENST00000552077 TRIM52Q96A61 297 aa22.9■■□□□ 1.26
TPCN1-219ENST00000552077 CCNB3Q8WWL7 1395 aa22.9■■□□□ 1.26
TPCN1-219ENST00000552077 RRBP1Q9P2E9 1410 aaKnown RBP22.9■■□□□ 1.26
TPCN1-219ENST00000552077 HIRIP3Q9BW71 556 aaPredicted RBP22.87■■□□□ 1.25
TPCN1-219ENST00000552077 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
TPCN1-219ENST00000552077 RAB3GAP2Q9H2M9 1393 aa22.84■■□□□ 1.25
TPCN1-219ENST00000552077 SIN3AQ96ST3 1273 aa22.84■■□□□ 1.25
TPCN1-219ENST00000552077 CUX2O14529 1486 aa22.78■■□□□ 1.24
TPCN1-219ENST00000552077 PRXQ9BXM0 1461 aa22.76■■□□□ 1.23
TPCN1-219ENST00000552077 MAPKBP1O60336 1514 aa22.75■■□□□ 1.23
TPCN1-219ENST00000552077 PPP1R15AO75807 674 aaPredicted RBP22.73■■□□□ 1.23
TPCN1-219ENST00000552077 ANP32CO43423 234 aa22.72■■□□□ 1.23
TPCN1-219ENST00000552077 WDR97A6NE52 1622 aa22.72■■□□□ 1.23
TPCN1-219ENST00000552077 ERICH3Q5RHP9 1530 aa22.71■■□□□ 1.23
TPCN1-219ENST00000552077 MSH5O43196 834 aa22.71■■□□□ 1.23
TPCN1-219ENST00000552077 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
TPCN1-219ENST00000552077 PEG3Q9GZU2 1588 aa22.7■■□□□ 1.22
TPCN1-219ENST00000552077 FAM50AQ14320 339 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms