Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 FLX1YIL134W 936 nt8.65□□□□□ -1.02
VPS38Q05919 RNA170RNA170 169 nt8.65□□□□□ -1.02
VPS38Q05919 LRO1YNR008W 1986 nt8.64□□□□□ -1.03
VPS38Q05919 EHT1YBR177C 1356 nt8.64□□□□□ -1.03
VPS38Q05919 INM1YHR046C 888 nt8.64□□□□□ -1.03
VPS38Q05919 DIP5YPL265W 1827 nt8.64□□□□□ -1.03
VPS38Q05919 TDA4YJR116W 840 nt8.62□□□□□ -1.03
VPS38Q05919 YLR280CYLR280C 351 nt8.62□□□□□ -1.03
VPS38Q05919 MET22YOL064C 1074 nt8.62□□□□□ -1.03
VPS38Q05919 CHS7YHR142W 951 nt8.61□□□□□ -1.03
VPS38Q05919 IPL1YPL209C 1104 nt8.61□□□□□ -1.03
VPS38Q05919 PMT7YDR307W 1989 nt8.61□□□□□ -1.03
VPS38Q05919 OLA1YBR025C 1185 nt8.6□□□□□ -1.03
VPS38Q05919 YDR510C-AYDR510C-A 117 nt8.59□□□□□ -1.03
VPS38Q05919 tS(GCU)LtS(GCU)L 80 nt8.59□□□□□ -1.03
VPS38Q05919 CYC3YAL039C 810 nt8.59□□□□□ -1.03
VPS38Q05919 YBR232CYBR232C 360 nt8.59□□□□□ -1.03
VPS38Q05919 SRP102YKL154W 735 nt8.58□□□□□ -1.04
VPS38Q05919 NME1NME1 340 nt8.58□□□□□ -1.04
VPS38Q05919 WSC4YHL028W 1818 nt8.58□□□□□ -1.04
VPS38Q05919 SLM3YDL033C 1254 nt8.57□□□□□ -1.04
VPS38Q05919 MRP7YNL005C 1116 nt8.57□□□□□ -1.04
VPS38Q05919 PDC6YGR087C 1692 nt8.56□□□□□ -1.04
VPS38Q05919 ARO3YDR035W 1113 nt8.56□□□□□ -1.04
VPS38Q05919 KTR4YBR199W 1395 nt8.56□□□□□ -1.04
VPS38Q05919 ERO1YML130C 1692 nt8.56□□□□□ -1.04
VPS38Q05919 YRF1-1YDR545W 5391 nt8.55□□□□□ -1.04
VPS38Q05919 YRF1-5YLR467W 5391 nt8.55□□□□□ -1.04
VPS38Q05919 YRF1-8YOR396W 5391 nt8.55□□□□□ -1.04
VPS38Q05919 RCF1YML030W 480 nt8.55□□□□□ -1.04
VPS38Q05919 MET13YGL125W 1803 nt8.54□□□□□ -1.04
VPS38Q05919 WSC3YOL105C 1671 nt8.54□□□□□ -1.04
VPS38Q05919 RPL2AYFR031C-A 765 nt8.54□□□□□ -1.04
VPS38Q05919 GAL2YLR081W 1725 nt8.54□□□□□ -1.04
VPS38Q05919 ALG7YBR243C 1347 nt8.54□□□□□ -1.04
VPS38Q05919 OCH1YGL038C 1443 nt8.53□□□□□ -1.04
VPS38Q05919 GTB1YDR221W 2109 nt8.53□□□□□ -1.04
VPS38Q05919 RHO1YPR165W 630 nt8.52□□□□□ -1.05
VPS38Q05919 YGR137WYGR137W 375 nt8.51□□□□□ -1.05
VPS38Q05919 SHC1YER096W 1539 nt8.5□□□□□ -1.05
VPS38Q05919 LPD1YFL018C 1500 nt8.5□□□□□ -1.05
VPS38Q05919 YEL034C-AYEL034C-A 603 nt8.5□□□□□ -1.05
VPS38Q05919 THI73YLR004C 1572 nt8.49□□□□□ -1.05
VPS38Q05919 YCR025CYCR025C 411 nt8.49□□□□□ -1.05
VPS38Q05919 CAK1YFL029C 1107 nt8.49□□□□□ -1.05
VPS38Q05919 HXT8YJL214W 1710 nt8.49□□□□□ -1.05
VPS38Q05919 PUP3YER094C 618 nt8.48□□□□□ -1.05
VPS38Q05919 YMR166CYMR166C 1107 nt8.48□□□□□ -1.05
VPS38Q05919 ELP6YMR312W 822 nt8.48□□□□□ -1.05
VPS38Q05919 RSC4YKR008W 1878 nt8.48□□□□□ -1.05
VPS38Q05919 YHL030W-AYHL030W-A 462 nt8.47□□□□□ -1.05
VPS38Q05919 YPL264CYPL264C 1062 nt8.47□□□□□ -1.05
VPS38Q05919 SER2YGR208W 930 nt8.46□□□□□ -1.06
VPS38Q05919 YGR210CYGR210C 1236 nt8.46□□□□□ -1.06
VPS38Q05919 SNP1YIL061C 903 nt8.46□□□□□ -1.06
VPS38Q05919 PMT1YDL095W 2454 nt8.46□□□□□ -1.06
VPS38Q05919 MTC6YHR151C 1581 nt8.45□□□□□ -1.06
VPS38Q05919 SGF73YGL066W 1974 nt8.45□□□□□ -1.06
VPS38Q05919 TPO1YLL028W 1761 nt8.44□□□□□ -1.06
VPS38Q05919 TOK1YJL093C 2076 nt8.44□□□□□ -1.06
VPS38Q05919 AIM34YMR003W 597 nt8.43□□□□□ -1.06
VPS38Q05919 LSP1YPL004C 1026 nt8.43□□□□□ -1.06
VPS38Q05919 TGA1tA(UGC)A 73 nt8.42□□□□□ -1.06
VPS38Q05919 tA(UGC)EtA(UGC)E 73 nt8.42□□□□□ -1.06
VPS38Q05919 tA(UGC)GtA(UGC)G 73 nt8.42□□□□□ -1.06
VPS38Q05919 tA(UGC)LtA(UGC)L 73 nt8.42□□□□□ -1.06
VPS38Q05919 tA(UGC)OtA(UGC)O 73 nt8.42□□□□□ -1.06
VPS38Q05919 Q0010Q0010 387 nt8.42□□□□□ -1.06
VPS38Q05919 RSC9YML127W 1746 nt8.42□□□□□ -1.06
VPS38Q05919 AVL9YLR114C 2295 nt8.42□□□□□ -1.06
VPS38Q05919 HTS1YPR033C 1641 nt8.41□□□□□ -1.06
VPS38Q05919 MAS1YLR163C 1389 nt8.41□□□□□ -1.06
VPS38Q05919 CKB1YGL019W 837 nt8.41□□□□□ -1.06
VPS38Q05919 RRT6YGL146C 936 nt8.41□□□□□ -1.06
VPS38Q05919 HXT9YJL219W 1704 nt8.4□□□□□ -1.06
VPS38Q05919 PRC1YMR297W 1599 nt8.4□□□□□ -1.06
VPS38Q05919 MCM5YLR274W 2328 nt8.4□□□□□ -1.06
VPS38Q05919 YPT31YER031C 672 nt8.4□□□□□ -1.06
VPS38Q05919 RRT14YIL127C 621 nt8.4□□□□□ -1.06
VPS38Q05919 CDA1YLR307W 906 nt8.4□□□□□ -1.06
VPS38Q05919 TES1YJR019C 1050 nt8.39□□□□□ -1.07
VPS38Q05919 YPL108WYPL108W 507 nt8.39□□□□□ -1.07
VPS38Q05919 YJL064WYJL064W 396 nt8.38□□□□□ -1.07
VPS38Q05919 PDC5YLR134W 1692 nt8.37□□□□□ -1.07
VPS38Q05919 MET30YIL046W 1923 nt8.37□□□□□ -1.07
VPS38Q05919 YER152CYER152C 1332 nt8.37□□□□□ -1.07
VPS38Q05919 ITR1YDR497C 1755 nt8.37□□□□□ -1.07
VPS38Q05919 PEX28YHR150W 1740 nt8.37□□□□□ -1.07
VPS38Q05919 SPE4YLR146C 903 nt8.36□□□□□ -1.07
VPS38Q05919 YNL190WYNL190W 615 nt8.36□□□□□ -1.07
VPS38Q05919 PRE10YOR362C 867 nt8.36□□□□□ -1.07
VPS38Q05919 CHA1YCL064C 1083 nt8.35□□□□□ -1.07
VPS38Q05919 SEN2YLR105C 1134 nt8.35□□□□□ -1.07
VPS38Q05919 TIM50YPL063W 1431 nt8.35□□□□□ -1.07
VPS38Q05919 BEM1YBR200W 1656 nt8.34□□□□□ -1.07
VPS38Q05919 FCY1YPR062W 477 nt8.34□□□□□ -1.07
VPS38Q05919 DST1YGL043W 930 nt8.32□□□□□ -1.08
VPS38Q05919 HAM1YJR069C 594 nt8.32□□□□□ -1.08
VPS38Q05919 AOS1YPR180W 1044 nt8.32□□□□□ -1.08
VPS38Q05919 RUP1YOR138C 2016 nt8.32□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 11.2 ms