Protein–RNA interactions for Protein: Q00723

PRP38, Pre-mRNA-splicing factor 38, yeastyeast

Predicted RBP Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP38Q00723 SER2YGR208W 930 nt7.84□□□□□ -1.15
PRP38Q00723 HTS1YPR033C 1641 nt7.84□□□□□ -1.15
PRP38Q00723 SOD2YHR008C 702 nt7.83□□□□□ -1.16
PRP38Q00723 SWM1YDR260C 513 nt7.82□□□□□ -1.16
PRP38Q00723 YLR460CYLR460C 1131 nt7.82□□□□□ -1.16
PRP38Q00723 YMR007WYMR007W 381 nt7.82□□□□□ -1.16
PRP38Q00723 YIL177CYIL177C 5277 nt7.81□□□□□ -1.16
PRP38Q00723 YRF1-3YGR296W 5580 nt7.81□□□□□ -1.16
PRP38Q00723 YRF1-6YNL339C 5580 nt7.81□□□□□ -1.16
PRP38Q00723 YRF1-7YPL283C 5580 nt7.81□□□□□ -1.16
PRP38Q00723 YLR280CYLR280C 351 nt7.81□□□□□ -1.16
PRP38Q00723 RCR1YBR005W 642 nt7.81□□□□□ -1.16
PRP38Q00723 MAS1YLR163C 1389 nt7.79□□□□□ -1.16
PRP38Q00723 INO1YJL153C 1602 nt7.78□□□□□ -1.16
PRP38Q00723 MDL2YPL270W 2322 nt7.78□□□□□ -1.16
PRP38Q00723 DIA4YHR011W 1341 nt7.78□□□□□ -1.16
PRP38Q00723 ERO1YML130C 1692 nt7.77□□□□□ -1.17
PRP38Q00723 BUD31YCR063W 474 nt7.77□□□□□ -1.17
PRP38Q00723 CHS7YHR142W 951 nt7.77□□□□□ -1.17
PRP38Q00723 ERG6YML008C 1152 nt7.77□□□□□ -1.17
PRP38Q00723 DUS3YLR401C 2007 nt7.77□□□□□ -1.17
PRP38Q00723 NDE2YDL085W 1638 nt7.77□□□□□ -1.17
PRP38Q00723 OLA1YBR025C 1185 nt7.76□□□□□ -1.17
PRP38Q00723 ADE16YLR028C 1776 nt7.76□□□□□ -1.17
PRP38Q00723 RNA170RNA170 169 nt7.75□□□□□ -1.17
PRP38Q00723 YNL140CYNL140C 570 nt7.75□□□□□ -1.17
PRP38Q00723 MET22YOL064C 1074 nt7.75□□□□□ -1.17
PRP38Q00723 TIF3YPR163C 1311 nt7.75□□□□□ -1.17
PRP38Q00723 POP2YNR052C 1302 nt7.74□□□□□ -1.17
PRP38Q00723 YGR210CYGR210C 1236 nt7.73□□□□□ -1.17
PRP38Q00723 LRO1YNR008W 1986 nt7.72□□□□□ -1.17
PRP38Q00723 GLY1YEL046C 1164 nt7.72□□□□□ -1.17
PRP38Q00723 INM1YHR046C 888 nt7.72□□□□□ -1.17
PRP38Q00723 NSG2YNL156C 900 nt7.72□□□□□ -1.17
PRP38Q00723 TGL5YOR081C 2250 nt7.72□□□□□ -1.17
PRP38Q00723 EHT1YBR177C 1356 nt7.71□□□□□ -1.17
PRP38Q00723 MRN1YPL184C 1839 nt7.71□□□□□ -1.17
PRP38Q00723 TDA4YJR116W 840 nt7.71□□□□□ -1.18
PRP38Q00723 PDC6YGR087C 1692 nt7.7□□□□□ -1.18
PRP38Q00723 OCH1YGL038C 1443 nt7.69□□□□□ -1.18
PRP38Q00723 DIP5YPL265W 1827 nt7.69□□□□□ -1.18
PRP38Q00723 FIT1YDR534C 1587 nt7.69□□□□□ -1.18
PRP38Q00723 TGA1tA(UGC)A 73 nt7.69□□□□□ -1.18
PRP38Q00723 tA(UGC)EtA(UGC)E 73 nt7.69□□□□□ -1.18
PRP38Q00723 tA(UGC)GtA(UGC)G 73 nt7.69□□□□□ -1.18
PRP38Q00723 tA(UGC)LtA(UGC)L 73 nt7.69□□□□□ -1.18
PRP38Q00723 tA(UGC)OtA(UGC)O 73 nt7.69□□□□□ -1.18
PRP38Q00723 YLR173WYLR173W 1827 nt7.68□□□□□ -1.18
PRP38Q00723 RCF1YML030W 480 nt7.68□□□□□ -1.18
PRP38Q00723 YPL108WYPL108W 507 nt7.68□□□□□ -1.18
PRP38Q00723 CAK1YFL029C 1107 nt7.67□□□□□ -1.18
PRP38Q00723 YMR166CYMR166C 1107 nt7.67□□□□□ -1.18
PRP38Q00723 FCY1YPR062W 477 nt7.67□□□□□ -1.18
PRP38Q00723 RHO1YPR165W 630 nt7.67□□□□□ -1.18
PRP38Q00723 TOM71YHR117W 1920 nt7.67□□□□□ -1.18
PRP38Q00723 GNP1YDR508C 1992 nt7.67□□□□□ -1.18
PRP38Q00723 UFD1YGR048W 1086 nt7.66□□□□□ -1.18
PRP38Q00723 MDH2YOL126C 1134 nt7.66□□□□□ -1.18
PRP38Q00723 YER152W-AYER152W-A 567 nt7.65□□□□□ -1.18
PRP38Q00723 MRP7YNL005C 1116 nt7.65□□□□□ -1.18
PRP38Q00723 WSC3YOL105C 1671 nt7.65□□□□□ -1.18
PRP38Q00723 THI73YLR004C 1572 nt7.64□□□□□ -1.19
PRP38Q00723 PFS2YNL317W 1398 nt7.64□□□□□ -1.19
PRP38Q00723 YDR510C-AYDR510C-A 117 nt7.64□□□□□ -1.19
PRP38Q00723 YGR137WYGR137W 375 nt7.64□□□□□ -1.19
PRP38Q00723 WSC4YHL028W 1818 nt7.64□□□□□ -1.19
PRP38Q00723 HSV2YGR223C 1347 nt7.63□□□□□ -1.19
PRP38Q00723 ARO3YDR035W 1113 nt7.63□□□□□ -1.19
PRP38Q00723 PUP3YER094C 618 nt7.63□□□□□ -1.19
PRP38Q00723 LSP1YPL004C 1026 nt7.63□□□□□ -1.19
PRP38Q00723 SHC1YER096W 1539 nt7.62□□□□□ -1.19
PRP38Q00723 KTR4YBR199W 1395 nt7.62□□□□□ -1.19
PRP38Q00723 ALG7YBR243C 1347 nt7.62□□□□□ -1.19
PRP38Q00723 YHL030W-AYHL030W-A 462 nt7.61□□□□□ -1.19
PRP38Q00723 HXT8YJL214W 1710 nt7.61□□□□□ -1.19
PRP38Q00723 RRT14YIL127C 621 nt7.6□□□□□ -1.19
PRP38Q00723 YPT31YER031C 672 nt7.59□□□□□ -1.19
PRP38Q00723 RPL2AYFR031C-A 765 nt7.59□□□□□ -1.19
PRP38Q00723 YJL160CYJL160C 864 nt7.59□□□□□ -1.19
PRP38Q00723 PMT7YDR307W 1989 nt7.57□□□□□ -1.2
PRP38Q00723 YRF1-1YDR545W 5391 nt7.56□□□□□ -1.2
PRP38Q00723 YRF1-5YLR467W 5391 nt7.56□□□□□ -1.2
PRP38Q00723 YRF1-8YOR396W 5391 nt7.56□□□□□ -1.2
PRP38Q00723 SLM3YDL033C 1254 nt7.56□□□□□ -1.2
PRP38Q00723 BUD20YLR074C 501 nt7.56□□□□□ -1.2
PRP38Q00723 RTG2YGL252C 1767 nt7.56□□□□□ -1.2
PRP38Q00723 MET13YGL125W 1803 nt7.55□□□□□ -1.2
PRP38Q00723 SNP1YIL061C 903 nt7.55□□□□□ -1.2
PRP38Q00723 GRH1YDR517W 1119 nt7.54□□□□□ -1.2
PRP38Q00723 HRA1HRA1 564 nt7.54□□□□□ -1.2
PRP38Q00723 ELP6YMR312W 822 nt7.54□□□□□ -1.2
PRP38Q00723 PRE10YOR362C 867 nt7.54□□□□□ -1.2
PRP38Q00723 MTC6YHR151C 1581 nt7.54□□□□□ -1.2
PRP38Q00723 YEL034C-AYEL034C-A 603 nt7.53□□□□□ -1.2
PRP38Q00723 YOR343CYOR343C 327 nt7.53□□□□□ -1.2
PRP38Q00723 PAU21YOR394W 495 nt7.53□□□□□ -1.2
PRP38Q00723 PAU22YPL282C 495 nt7.53□□□□□ -1.2
PRP38Q00723 MFT1YML062C 1179 nt7.52□□□□□ -1.21
PRP38Q00723 TIM50YPL063W 1431 nt7.52□□□□□ -1.21
PRP38Q00723 PET18YCR020C 648 nt7.51□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms