Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YIR035CYIR035C 765 nt8.92□□□□□ -0.98
SSL2Q00578 RSM7YJR113C 744 nt8.92□□□□□ -0.98
SSL2Q00578 PMT1YDL095W 2454 nt8.91□□□□□ -0.98
SSL2Q00578 FLX1YIL134W 936 nt8.91□□□□□ -0.98
SSL2Q00578 PAU15YIR041W 375 nt8.91□□□□□ -0.98
SSL2Q00578 TOK1YJL093C 2076 nt8.91□□□□□ -0.98
SSL2Q00578 ENO1YGR254W 1314 nt8.9□□□□□ -0.98
SSL2Q00578 TIF3YPR163C 1311 nt8.9□□□□□ -0.98
SSL2Q00578 ARO3YDR035W 1113 nt8.9□□□□□ -0.98
SSL2Q00578 MET22YOL064C 1074 nt8.9□□□□□ -0.98
SSL2Q00578 ALG7YBR243C 1347 nt8.89□□□□□ -0.99
SSL2Q00578 SHC1YER096W 1539 nt8.89□□□□□ -0.99
SSL2Q00578 TPO1YLL028W 1761 nt8.89□□□□□ -0.99
SSL2Q00578 YNL140CYNL140C 570 nt8.88□□□□□ -0.99
SSL2Q00578 Q0010Q0010 387 nt8.88□□□□□ -0.99
SSL2Q00578 TGL5YOR081C 2250 nt8.87□□□□□ -0.99
SSL2Q00578 STP3YLR375W 1032 nt8.87□□□□□ -0.99
SSL2Q00578 ELP6YMR312W 822 nt8.87□□□□□ -0.99
SSL2Q00578 YBR232CYBR232C 360 nt8.87□□□□□ -0.99
SSL2Q00578 HEM14YER014W 1620 nt8.86□□□□□ -0.99
SSL2Q00578 IPL1YPL209C 1104 nt8.85□□□□□ -0.99
SSL2Q00578 LPD1YFL018C 1500 nt8.85□□□□□ -0.99
SSL2Q00578 INM1YHR046C 888 nt8.84□□□□□ -0.99
SSL2Q00578 YLR280CYLR280C 351 nt8.84□□□□□ -0.99
SSL2Q00578 HXT8YJL214W 1710 nt8.83□□□□□ -1
SSL2Q00578 PDC6YGR087C 1692 nt8.82□□□□□ -1
SSL2Q00578 SLM3YDL033C 1254 nt8.81□□□□□ -1
SSL2Q00578 TDA4YJR116W 840 nt8.81□□□□□ -1
SSL2Q00578 ERO1YML130C 1692 nt8.8□□□□□ -1
SSL2Q00578 SGF73YGL066W 1974 nt8.79□□□□□ -1
SSL2Q00578 RPL2AYFR031C-A 765 nt8.79□□□□□ -1
SSL2Q00578 SRP102YKL154W 735 nt8.79□□□□□ -1
SSL2Q00578 MRP7YNL005C 1116 nt8.79□□□□□ -1
SSL2Q00578 PDC5YLR134W 1692 nt8.78□□□□□ -1
SSL2Q00578 AIM34YMR003W 597 nt8.78□□□□□ -1
SSL2Q00578 OCH1YGL038C 1443 nt8.78□□□□□ -1
SSL2Q00578 MTC6YHR151C 1581 nt8.78□□□□□ -1
SSL2Q00578 KTR4YBR199W 1395 nt8.77□□□□□ -1.01
SSL2Q00578 RSC4YKR008W 1878 nt8.77□□□□□ -1.01
SSL2Q00578 SNA3YJL151C 402 nt8.76□□□□□ -1.01
SSL2Q00578 PRC1YMR297W 1599 nt8.76□□□□□ -1.01
SSL2Q00578 CYC3YAL039C 810 nt8.75□□□□□ -1.01
SSL2Q00578 RHO1YPR165W 630 nt8.75□□□□□ -1.01
SSL2Q00578 CAK1YFL029C 1107 nt8.74□□□□□ -1.01
SSL2Q00578 CHS7YHR142W 951 nt8.74□□□□□ -1.01
SSL2Q00578 YLR460CYLR460C 1131 nt8.74□□□□□ -1.01
SSL2Q00578 RCF1YML030W 480 nt8.74□□□□□ -1.01
SSL2Q00578 tS(GCU)LtS(GCU)L 80 nt8.73□□□□□ -1.01
SSL2Q00578 PUS7YOR243C 2031 nt8.73□□□□□ -1.01
SSL2Q00578 LAS17YOR181W 1902 nt8.72□□□□□ -1.01
SSL2Q00578 YEL034C-AYEL034C-A 603 nt8.72□□□□□ -1.01
SSL2Q00578 PUP3YER094C 618 nt8.72□□□□□ -1.01
SSL2Q00578 WSC3YOL105C 1671 nt8.72□□□□□ -1.01
SSL2Q00578 HXT9YJL219W 1704 nt8.71□□□□□ -1.01
SSL2Q00578 ITR1YDR497C 1755 nt8.71□□□□□ -1.01
SSL2Q00578 TGA1tA(UGC)A 73 nt8.71□□□□□ -1.02
SSL2Q00578 tA(UGC)EtA(UGC)E 73 nt8.71□□□□□ -1.02
SSL2Q00578 tA(UGC)GtA(UGC)G 73 nt8.71□□□□□ -1.02
SSL2Q00578 tA(UGC)LtA(UGC)L 73 nt8.71□□□□□ -1.02
SSL2Q00578 tA(UGC)OtA(UGC)O 73 nt8.71□□□□□ -1.02
SSL2Q00578 SNP1YIL061C 903 nt8.71□□□□□ -1.02
SSL2Q00578 THI73YLR004C 1572 nt8.7□□□□□ -1.02
SSL2Q00578 YNL190WYNL190W 615 nt8.7□□□□□ -1.02
SSL2Q00578 YPL264CYPL264C 1062 nt8.7□□□□□ -1.02
SSL2Q00578 PEX28YHR150W 1740 nt8.7□□□□□ -1.02
SSL2Q00578 AVL9YLR114C 2295 nt8.7□□□□□ -1.02
SSL2Q00578 SER2YGR208W 930 nt8.69□□□□□ -1.02
SSL2Q00578 YGR210CYGR210C 1236 nt8.69□□□□□ -1.02
SSL2Q00578 YMR166CYMR166C 1107 nt8.69□□□□□ -1.02
SSL2Q00578 OLA1YBR025C 1185 nt8.69□□□□□ -1.02
SSL2Q00578 PET18YCR020C 648 nt8.68□□□□□ -1.02
SSL2Q00578 YHL030W-AYHL030W-A 462 nt8.68□□□□□ -1.02
SSL2Q00578 CSM2YIL132C 642 nt8.68□□□□□ -1.02
SSL2Q00578 YER152CYER152C 1332 nt8.68□□□□□ -1.02
SSL2Q00578 YDR306CYDR306C 1437 nt8.68□□□□□ -1.02
SSL2Q00578 CHA1YCL064C 1083 nt8.67□□□□□ -1.02
SSL2Q00578 MET30YIL046W 1923 nt8.66□□□□□ -1.02
SSL2Q00578 ALR1YOL130W 2580 nt8.66□□□□□ -1.02
SSL2Q00578 DST1YGL043W 930 nt8.66□□□□□ -1.02
SSL2Q00578 BEM1YBR200W 1656 nt8.65□□□□□ -1.03
SSL2Q00578 YCR025CYCR025C 411 nt8.64□□□□□ -1.03
SSL2Q00578 CKB1YGL019W 837 nt8.64□□□□□ -1.03
SSL2Q00578 YJL064WYJL064W 396 nt8.64□□□□□ -1.03
SSL2Q00578 CDA1YLR307W 906 nt8.64□□□□□ -1.03
SSL2Q00578 VPS65YLR322W 315 nt8.64□□□□□ -1.03
SSL2Q00578 LSP1YPL004C 1026 nt8.64□□□□□ -1.03
SSL2Q00578 YPL108WYPL108W 507 nt8.64□□□□□ -1.03
SSL2Q00578 RUP1YOR138C 2016 nt8.64□□□□□ -1.03
SSL2Q00578 YRF1-1YDR545W 5391 nt8.63□□□□□ -1.03
SSL2Q00578 YRF1-5YLR467W 5391 nt8.63□□□□□ -1.03
SSL2Q00578 YRF1-8YOR396W 5391 nt8.63□□□□□ -1.03
SSL2Q00578 YBL113CYBL113C 2379 nt8.63□□□□□ -1.03
SSL2Q00578 RSC9YML127W 1746 nt8.63□□□□□ -1.03
SSL2Q00578 RRT6YGL146C 936 nt8.62□□□□□ -1.03
SSL2Q00578 BXI1YNL305C 894 nt8.61□□□□□ -1.03
SSL2Q00578 TIM50YPL063W 1431 nt8.61□□□□□ -1.03
SSL2Q00578 JHD1YER051W 1479 nt8.6□□□□□ -1.03
SSL2Q00578 YLR030WYLR030W 792 nt8.6□□□□□ -1.03
SSL2Q00578 HTS1YPR033C 1641 nt8.59□□□□□ -1.03
SSL2Q00578 TES1YJR019C 1050 nt8.59□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 25.6 ms