Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CSPG5O95196 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
CSPG5O95196 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.7■■■□□ 2.02
CSPG5O95196 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.7■■■□□ 2.02
CSPG5O95196 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.7■■■□□ 2.02
CSPG5O95196 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CSPG5O95196 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CSPG5O95196 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
CSPG5O95196 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CSPG5O95196 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CSPG5O95196 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CSPG5O95196 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CSPG5O95196 AC008813.1-201ENST00000536597 885 ntBASIC27.68■■■□□ 2.02
CSPG5O95196 AL033527.3-201ENST00000566366 1196 ntBASIC27.67■■■□□ 2.02
CSPG5O95196 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
CSPG5O95196 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.67■■■□□ 2.02
CSPG5O95196 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.67■■■□□ 2.02
CSPG5O95196 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.66■■■□□ 2.02
CSPG5O95196 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
CSPG5O95196 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.66■■■□□ 2.02
CSPG5O95196 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CSPG5O95196 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CSPG5O95196 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CSPG5O95196 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.63■■■□□ 2.01
CSPG5O95196 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CSPG5O95196 WHAMMP2-203ENST00000563942 1603 ntBASIC27.63■■■□□ 2.01
CSPG5O95196 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
CSPG5O95196 AC127502.1-201ENST00000399971 1502 ntBASIC27.62■■■□□ 2.01
CSPG5O95196 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.62■■■□□ 2.01
CSPG5O95196 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CSPG5O95196 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CSPG5O95196 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
CSPG5O95196 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CSPG5O95196 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CSPG5O95196 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CSPG5O95196 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CSPG5O95196 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
CSPG5O95196 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.57■■■□□ 2
CSPG5O95196 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC27.57■■■□□ 2
CSPG5O95196 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CSPG5O95196 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.57■■■□□ 2
CSPG5O95196 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CSPG5O95196 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
CSPG5O95196 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.56■■■□□ 2
CSPG5O95196 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.56■■■□□ 2
CSPG5O95196 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CSPG5O95196 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
CSPG5O95196 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
CSPG5O95196 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
CSPG5O95196 U85056.1-201ENST00000616429 682 ntBASIC27.55■■■□□ 2
CSPG5O95196 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CSPG5O95196 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
CSPG5O95196 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.54■■■□□ 2
CSPG5O95196 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
CSPG5O95196 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.53■■■□□ 2
CSPG5O95196 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.52■■■□□ 2
CSPG5O95196 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.52■■■□□ 2
CSPG5O95196 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.52■■■□□ 2
CSPG5O95196 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
CSPG5O95196 AC135983.2-203ENST00000454486 1613 ntBASIC27.5■■□□□ 1.99
CSPG5O95196 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
CSPG5O95196 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.5■■□□□ 1.99
CSPG5O95196 AC110285.7-201ENST00000624417 1536 ntBASIC27.5■■□□□ 1.99
CSPG5O95196 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
CSPG5O95196 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.49■■□□□ 1.99
CSPG5O95196 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CSPG5O95196 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
CSPG5O95196 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CSPG5O95196 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.49■■□□□ 1.99
CSPG5O95196 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
CSPG5O95196 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CSPG5O95196 AC018358.1-201ENST00000631079 1402 ntBASIC27.49■■□□□ 1.99
CSPG5O95196 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.48■■□□□ 1.99
CSPG5O95196 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.48■■□□□ 1.99
CSPG5O95196 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.48■■□□□ 1.99
CSPG5O95196 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CSPG5O95196 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CSPG5O95196 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.45■■□□□ 1.98
CSPG5O95196 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.45■■□□□ 1.98
CSPG5O95196 AC060814.1-201ENST00000554326 538 ntBASIC27.45■■□□□ 1.98
CSPG5O95196 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CSPG5O95196 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
CSPG5O95196 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
CSPG5O95196 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.43■■□□□ 1.98
CSPG5O95196 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CSPG5O95196 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.43■■□□□ 1.98
CSPG5O95196 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
CSPG5O95196 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.43■■□□□ 1.98
CSPG5O95196 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
CSPG5O95196 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CSPG5O95196 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CSPG5O95196 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.39■■□□□ 1.98
CSPG5O95196 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CSPG5O95196 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
CSPG5O95196 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.39■■□□□ 1.97
CSPG5O95196 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CSPG5O95196 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CSPG5O95196 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.38■■□□□ 1.97
CSPG5O95196 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.37■■□□□ 1.97
CSPG5O95196 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms