Protein–RNA interactions for Protein: Q8N815

CNTD1, Cyclin N-terminal domain-containing protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1Q8N815 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CNTD1Q8N815 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTD1Q8N815 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTD1Q8N815 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTD1Q8N815 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTD1Q8N815 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTD1Q8N815 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTD1Q8N815 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.9■□□□□ 0.78
CNTD1Q8N815 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTD1Q8N815 YBX1P10-201ENST00000444752 975 ntBASIC19.9■□□□□ 0.78
CNTD1Q8N815 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.9■□□□□ 0.78
CNTD1Q8N815 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.9■□□□□ 0.78
CNTD1Q8N815 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTD1Q8N815 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.9■□□□□ 0.78
CNTD1Q8N815 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTD1Q8N815 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTD1Q8N815 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTD1Q8N815 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTD1Q8N815 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTD1Q8N815 Z82202.1-201ENST00000623446 1880 ntBASIC19.9■□□□□ 0.78
CNTD1Q8N815 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CNTD1Q8N815 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTD1Q8N815 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CNTD1Q8N815 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTD1Q8N815 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTD1Q8N815 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTD1Q8N815 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTD1Q8N815 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTD1Q8N815 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.89■□□□□ 0.77
CNTD1Q8N815 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTD1Q8N815 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.89■□□□□ 0.77
CNTD1Q8N815 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNTD1Q8N815 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.89■□□□□ 0.77
CNTD1Q8N815 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTD1Q8N815 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTD1Q8N815 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTD1Q8N815 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTD1Q8N815 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTD1Q8N815 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
CNTD1Q8N815 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNTD1Q8N815 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNTD1Q8N815 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTD1Q8N815 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTD1Q8N815 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
CNTD1Q8N815 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTD1Q8N815 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTD1Q8N815 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTD1Q8N815 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTD1Q8N815 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTD1Q8N815 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTD1Q8N815 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTD1Q8N815 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTD1Q8N815 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTD1Q8N815 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 POU5F1P3-201ENST00000428824 1078 ntBASIC19.88■□□□□ 0.77
CNTD1Q8N815 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 KRT18P16-201ENST00000510337 1294 ntBASIC19.88■□□□□ 0.77
CNTD1Q8N815 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTD1Q8N815 AC073648.6-201ENST00000641589 218 ntBASIC19.88■□□□□ 0.77
CNTD1Q8N815 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CNTD1Q8N815 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTD1Q8N815 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTD1Q8N815 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTD1Q8N815 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTD1Q8N815 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTD1Q8N815 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTD1Q8N815 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.87■□□□□ 0.77
CNTD1Q8N815 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTD1Q8N815 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.87■□□□□ 0.77
CNTD1Q8N815 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTD1Q8N815 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTD1Q8N815 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CNTD1Q8N815 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.87■□□□□ 0.77
CNTD1Q8N815 AC006058.3-201ENST00000606217 1069 ntBASIC19.87■□□□□ 0.77
CNTD1Q8N815 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTD1Q8N815 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTD1Q8N815 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CNTD1Q8N815 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.87■□□□□ 0.77
CNTD1Q8N815 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CNTD1Q8N815 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTD1Q8N815 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTD1Q8N815 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTD1Q8N815 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTD1Q8N815 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTD1Q8N815 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.86■□□□□ 0.77
CNTD1Q8N815 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.86■□□□□ 0.77
CNTD1Q8N815 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNTD1Q8N815 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNTD1Q8N815 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.86■□□□□ 0.77
CNTD1Q8N815 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms