Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 KRT17P3-201ENST00000420566 1262 ntBASIC18.87■□□□□ 0.61
KRT78Q8N1N4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 AC026366.1-201ENST00000488803 879 ntBASIC18.87■□□□□ 0.61
KRT78Q8N1N4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 PRKY-204ENST00000533551 1019 ntBASIC18.87■□□□□ 0.61
KRT78Q8N1N4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 TREX1-205ENST00000625293 1783 ntBASIC18.87■□□□□ 0.61
KRT78Q8N1N4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
KRT78Q8N1N4 AL158211.5-201ENST00000623583 2518 ntBASIC18.85■□□□□ 0.61
KRT78Q8N1N4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 AC008403.3-201ENST00000598924 454 ntBASIC18.85■□□□□ 0.61
KRT78Q8N1N4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT78Q8N1N4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 YBX1P10-201ENST00000444752 975 ntBASIC18.84■□□□□ 0.61
KRT78Q8N1N4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT78Q8N1N4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT78Q8N1N4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
KRT78Q8N1N4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT78Q8N1N4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.83■□□□□ 0.61
KRT78Q8N1N4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms