Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.99■□□□□ 0.63
SNAP47Q5SQN1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 AC018553.1-201ENST00000616682 1458 ntBASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNAP47Q5SQN1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAP47Q5SQN1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 NUDT16P1-203ENST00000513809 620 ntBASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 AC116351.2-201ENST00000606540 1585 ntBASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 AL157384.1-201ENST00000445995 2473 ntBASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.96■□□□□ 0.63
SNAP47Q5SQN1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 MMP23A-201ENST00000234610 1017 ntBASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 NIFKP9-201ENST00000419265 221 ntBASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 FAM210CP-201ENST00000445714 574 ntBASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SNAP47Q5SQN1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms