RNA–Protein interactions for RNA: ENST00000234610.5

MMP23A-201, Transcript of matrix metallopeptidase 23A (pseudogene), humanhuman

BASIC

Gene MMP23A, Length 1,017 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP23A-201ENST00000234610 NISCHQ9Y2I1 1504 aa47.58■■■■■ 5.21
MMP23A-201ENST00000234610 CCDC180Q9P1Z9 1646 aa42.53■■■■■ 4.4
MMP23A-201ENST00000234610 ABCC9O60706 1549 aa42.36■■■■■ 4.37
MMP23A-201ENST00000234610 RB1CC1Q8TDY2 1594 aa40.43■■■■■ 4.06
MMP23A-201ENST00000234610 NACADO15069 1562 aa40.22■■■■■ 4.03
MMP23A-201ENST00000234610 DCAF8L2P0C7V8 631 aa40.19■■■■■ 4.02
MMP23A-201ENST00000234610 MYO15BQ96JP2 1530 aa39.75■■■■□ 3.95
MMP23A-201ENST00000234610 DNAJC5BQ9UF47 199 aa39.58■■■■□ 3.93
MMP23A-201ENST00000234610 PABPN1Q86U42 306 aaKnown RBP eCLIP39.54■■■■□ 3.92
MMP23A-201ENST00000234610 ZCCHC6Q5VYS8 1495 aaKnown RBP39.45■■■■□ 3.91
MMP23A-201ENST00000234610 UNC13AQ9UPW8 1703 aa39.39■■■■□ 3.9
MMP23A-201ENST00000234610 DCAF1Q9Y4B6 1507 aa39.31■■■■□ 3.88
MMP23A-201ENST00000234610 BICRAQ9NZM4 1560 aa39.19■■■■□ 3.86
MMP23A-201ENST00000234610 SCRIBQ14160 1630 aa38.78■■■■□ 3.8
MMP23A-201ENST00000234610 SHROOM4Q9ULL8 1493 aa38.74■■■■□ 3.79
MMP23A-201ENST00000234610 CC2D2AQ9P2K1 1620 aa38.25■■■■□ 3.71
MMP23A-201ENST00000234610 EIF4G1Q04637 1599 aaKnown RBP38.23■■■■□ 3.71
MMP23A-201ENST00000234610 CECR2Q9BXF3 1484 aa38.15■■■■□ 3.7
MMP23A-201ENST00000234610 NCAPD3P42695 1498 aa37.15■■■■□ 3.54
MMP23A-201ENST00000234610 ATAD2BQ9ULI0 1458 aa37.05■■■■□ 3.52
MMP23A-201ENST00000234610 SMARCA4P51532 1647 aa37.03■■■■□ 3.52
MMP23A-201ENST00000234610 SMARCA2P51531 1590 aa36.95■■■■□ 3.51
MMP23A-201ENST00000234610 BAZ1AQ9NRL2 1556 aaPredicted RBP36.91■■■■□ 3.5
MMP23A-201ENST00000234610 HMGXB3Q12766 1538 aa36.84■■■■□ 3.49
MMP23A-201ENST00000234610 BAZ1BQ9UIG0 1483 aaKnown RBP36.7■■■■□ 3.47
MMP23A-201ENST00000234610 PEG3Q9GZU2 1588 aa36.67■■■■□ 3.46
MMP23A-201ENST00000234610 MROH2BQ7Z745 1585 aa36.65■■■■□ 3.46
MMP23A-201ENST00000234610 ERCC6Q03468 1493 aa36.59■■■■□ 3.45
MMP23A-201ENST00000234610 NESP48681 1621 aa36.44■■■■□ 3.42
MMP23A-201ENST00000234610 CUX2O14529 1486 aa36.43■■■■□ 3.42
MMP23A-201ENST00000234610 LAMC3Q9Y6N6 1575 aa36.23■■■■□ 3.39
MMP23A-201ENST00000234610 DNAJC5Q9H3Z4 198 aa36.21■■■■□ 3.39
MMP23A-201ENST00000234610 WIZO95785 1651 aa36.19■■■■□ 3.38
MMP23A-201ENST00000234610 PDS5BQ9NTI5 1447 aa36.08■■■■□ 3.37
MMP23A-201ENST00000234610 CADPSQ9ULU8 1353 aa36.05■■■■□ 3.36
MMP23A-201ENST00000234610 RSF1Q96T23 1441 aaPredicted RBP36.01■■■■□ 3.36
MMP23A-201ENST00000234610 THOC2Q8NI27 1593 aaKnown RBP35.98■■■■□ 3.35
MMP23A-201ENST00000234610 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
MMP23A-201ENST00000234610 TOP2AP11388 1531 aaKnown RBP35.78■■■■□ 3.32
MMP23A-201ENST00000234610 MRC2Q9UBG0 1479 aa35.7■■■■□ 3.31
MMP23A-201ENST00000234610 CFTRP13569 1480 aa35.66■■■■□ 3.3
MMP23A-201ENST00000234610 CEP164Q9UPV0 1460 aa35.61■■■■□ 3.29
MMP23A-201ENST00000234610 FANCD2Q9BXW9 1451 aa35.6■■■■□ 3.29
MMP23A-201ENST00000234610 WDR62O43379 1518 aa35.57■■■■□ 3.29
MMP23A-201ENST00000234610 CCDC88BA6NC98 1476 aa35.41■■■■□ 3.26
MMP23A-201ENST00000234610 URB2Q14146 1524 aaKnown RBP35.27■■■■□ 3.24
MMP23A-201ENST00000234610 PRDM2Q13029 1718 aa35.19■■■■□ 3.22
MMP23A-201ENST00000234610 TOPBP1Q92547 1522 aa34.95■■■■□ 3.19
MMP23A-201ENST00000234610 ABCC8Q09428 1581 aa34.95■■■■□ 3.18
MMP23A-201ENST00000234610 IFT140Q96RY7 1462 aa34.92■■■■□ 3.18
MMP23A-201ENST00000234610 OSCARQ8IYS5 282 aa34.91■■■■□ 3.18
MMP23A-201ENST00000234610 DNMBPQ6XZF7 1577 aa34.82■■■■□ 3.16
MMP23A-201ENST00000234610 ZNF608Q9ULD9 1512 aaPredicted RBP34.81■■■■□ 3.16
MMP23A-201ENST00000234610 TRIM41Q8WV44 630 aa34.71■■■■□ 3.15
MMP23A-201ENST00000234610 SUPT5HO00267 1087 aaKnown RBP34.67■■■■□ 3.14
MMP23A-201ENST00000234610 POLA1P09884 1462 aaPredicted RBP34.6■■■■□ 3.13
MMP23A-201ENST00000234610 TARBP1Q13395 1621 aaKnown RBP34.58■■■■□ 3.13
MMP23A-201ENST00000234610 EIF4G3O43432 1585 aaKnown RBP34.57■■■■□ 3.13
MMP23A-201ENST00000234610 AQRO60306 1485 aaKnown RBP eCLIP34.56■■■■□ 3.12
MMP23A-201ENST00000234610 SOGA1O94964 1423 aa34.51■■■■□ 3.12
MMP23A-201ENST00000234610 RAD54L2Q9Y4B4 1467 aa34.49■■■■□ 3.11
MMP23A-201ENST00000234610 FGD5Q6ZNL6 1462 aa34.42■■■■□ 3.1
MMP23A-201ENST00000234610 CUX1P39880 1505 aa34.4■■■■□ 3.1
MMP23A-201ENST00000234610 TDRD9Q8NDG6 1382 aaKnown RBP34.4■■■■□ 3.1
MMP23A-201ENST00000234610 FBLN2P98095 1184 aa34.36■■■■□ 3.09
MMP23A-201ENST00000234610 RIMBP3CA6NJZ7 1639 aa34.28■■■■□ 3.08
MMP23A-201ENST00000234610 RIMBP3BA6NNM3 1639 aa34.28■■■■□ 3.08
MMP23A-201ENST00000234610 RIMBP3Q9UFD9 1639 aa34.28■■■■□ 3.08
MMP23A-201ENST00000234610 WDR97A6NE52 1622 aa34.27■■■■□ 3.08
MMP23A-201ENST00000234610 CHD1O14646 1710 aa34.24■■■■□ 3.07
MMP23A-201ENST00000234610 ARHGEF11O15085 1522 aa34.22■■■■□ 3.07
MMP23A-201ENST00000234610 SNAPC4Q5SXM2 1469 aa34.18■■■■□ 3.06
MMP23A-201ENST00000234610 GRIN2BQ13224 1484 aa34.16■■■■□ 3.06
MMP23A-201ENST00000234610 CHMP7Q8WUX9 453 aaPredicted RBP34.15■■■■□ 3.06
MMP23A-201ENST00000234610 MAGI1Q96QZ7 1491 aaPredicted RBP34.12■■■■□ 3.05
MMP23A-201ENST00000234610 GAPVD1Q14C86 1478 aa34.07■■■■□ 3.04
MMP23A-201ENST00000234610 ABCA10Q8WWZ4 1543 aa34.06■■■■□ 3.04
MMP23A-201ENST00000234610 CYB5RLQ6IPT4 315 aa34.06■■■■□ 3.04
MMP23A-201ENST00000234610 WRNQ14191 1432 aaPredicted RBP eCLIP34.01■■■■□ 3.03
MMP23A-201ENST00000234610 SYNJ2O15056 1496 aa34.01■■■■□ 3.03
MMP23A-201ENST00000234610 SYNJ1O43426 1573 aa33.95■■■■□ 3.03
MMP23A-201ENST00000234610 ABCA5Q8WWZ7 1642 aa33.93■■■■□ 3.02
MMP23A-201ENST00000234610 PBRM1Q86U86 1689 aa33.93■■■■□ 3.02
MMP23A-201ENST00000234610 TOP2BQ02880 1626 aa33.92■■■■□ 3.02
MMP23A-201ENST00000234610 CLASP1Q7Z460 1538 aa33.9■■■■□ 3.02
MMP23A-201ENST00000234610 BIVM-ERCC5R4GMW8 1640 aa33.9■■■■□ 3.02
MMP23A-201ENST00000234610 ARAP1Q96P48 1450 aa33.89■■■■□ 3.02
MMP23A-201ENST00000234610 GRIN2AQ12879 1464 aa33.69■■■□□ 2.98
MMP23A-201ENST00000234610 FHAD1B1AJZ9 1412 aa33.66■■■□□ 2.98
MMP23A-201ENST00000234610 ADAMTS12P58397 1594 aa33.64■■■□□ 2.98
MMP23A-201ENST00000234610 ERICH3Q5RHP9 1530 aa33.63■■■□□ 2.97
MMP23A-201ENST00000234610 TRHP20396 242 aaPredicted RBP33.62■■■□□ 2.97
MMP23A-201ENST00000234610 NUP160Q12769 1436 aa33.57■■■□□ 2.96
MMP23A-201ENST00000234610 CEP170Q5SW79 1584 aa33.52■■■□□ 2.96
MMP23A-201ENST00000234610 ERCC6L2Q5T890 1561 aa33.39■■■□□ 2.94
MMP23A-201ENST00000234610 SHROOM2Q13796 1616 aa33.35■■■□□ 2.93
MMP23A-201ENST00000234610 KIF27Q86VH2 1401 aa33.34■■■□□ 2.93
MMP23A-201ENST00000234610 JPH4Q96JJ6 628 aa33.33■■■□□ 2.93
MMP23A-201ENST00000234610 IGF1RP08069 1367 aa33.32■■■□□ 2.92
MMP23A-201ENST00000234610 PRG4Q92954 1404 aaPredicted RBP33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms