Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SFTPBP07988 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SFTPBP07988 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SFTPBP07988 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SFTPBP07988 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SFTPBP07988 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SFTPBP07988 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SFTPBP07988 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SFTPBP07988 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SFTPBP07988 KRT8P17-201ENST00000453110 1448 ntBASIC16.95■□□□□ 0.3
SFTPBP07988 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SFTPBP07988 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SFTPBP07988 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SFTPBP07988 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.94■□□□□ 0.3
SFTPBP07988 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.94■□□□□ 0.3
SFTPBP07988 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.94■□□□□ 0.3
SFTPBP07988 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.94■□□□□ 0.3
SFTPBP07988 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.94■□□□□ 0.3
SFTPBP07988 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.94■□□□□ 0.3
SFTPBP07988 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.94■□□□□ 0.3
SFTPBP07988 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.94■□□□□ 0.3
SFTPBP07988 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.94■□□□□ 0.3
SFTPBP07988 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
SFTPBP07988 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.94■□□□□ 0.3
SFTPBP07988 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SFTPBP07988 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SFTPBP07988 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.93■□□□□ 0.3
SFTPBP07988 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.93■□□□□ 0.3
SFTPBP07988 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.93■□□□□ 0.3
SFTPBP07988 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.93■□□□□ 0.3
SFTPBP07988 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.93■□□□□ 0.3
SFTPBP07988 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.93■□□□□ 0.3
SFTPBP07988 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.93■□□□□ 0.3
SFTPBP07988 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.93■□□□□ 0.3
SFTPBP07988 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SFTPBP07988 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SFTPBP07988 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SFTPBP07988 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SFTPBP07988 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.92■□□□□ 0.3
SFTPBP07988 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SFTPBP07988 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SFTPBP07988 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.92■□□□□ 0.3
SFTPBP07988 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.92■□□□□ 0.3
SFTPBP07988 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SFTPBP07988 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SFTPBP07988 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SFTPBP07988 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SFTPBP07988 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SFTPBP07988 CD99P1-205ENST00000527459 561 ntBASIC16.92■□□□□ 0.3
SFTPBP07988 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.92■□□□□ 0.3
SFTPBP07988 AL031963.3-201ENST00000606441 850 ntBASIC16.92■□□□□ 0.3
SFTPBP07988 AC092118.2-201ENST00000613495 667 ntBASIC16.92■□□□□ 0.3
SFTPBP07988 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SFTPBP07988 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SFTPBP07988 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SFTPBP07988 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SFTPBP07988 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SFTPBP07988 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SFTPBP07988 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SFTPBP07988 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
SFTPBP07988 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SFTPBP07988 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.91■□□□□ 0.3
SFTPBP07988 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms