Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00271P0C7V0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
LINC00271P0C7V0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LINC00271P0C7V0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00271P0C7V0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00271P0C7V0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LINC00271P0C7V0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00271P0C7V0 PCED1CP-201ENST00000419887 785 ntBASIC20.9■□□□□ 0.94
LINC00271P0C7V0 AL353719.1-201ENST00000566847 864 ntBASIC20.9■□□□□ 0.94
LINC00271P0C7V0 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.9■□□□□ 0.94
LINC00271P0C7V0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00271P0C7V0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00271P0C7V0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00271P0C7V0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
LINC00271P0C7V0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00271P0C7V0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.89■□□□□ 0.93
LINC00271P0C7V0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00271P0C7V0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.89■□□□□ 0.93
LINC00271P0C7V0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
LINC00271P0C7V0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00271P0C7V0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00271P0C7V0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00271P0C7V0 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.89■□□□□ 0.93
LINC00271P0C7V0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LINC00271P0C7V0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00271P0C7V0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 DUSP5P1-201ENST00000441325 1139 ntBASIC20.88■□□□□ 0.93
LINC00271P0C7V0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 AL441883.1-201ENST00000566170 1045 ntBASIC20.88■□□□□ 0.93
LINC00271P0C7V0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LINC00271P0C7V0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.87■□□□□ 0.93
LINC00271P0C7V0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.87■□□□□ 0.93
LINC00271P0C7V0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 TSPY17P-201ENST00000450329 467 ntBASIC20.86■□□□□ 0.93
LINC00271P0C7V0 AC092647.4-201ENST00000457211 535 ntBASIC20.86■□□□□ 0.93
LINC00271P0C7V0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 AC092720.2-201ENST00000602388 1665 ntBASIC20.86■□□□□ 0.93
LINC00271P0C7V0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00271P0C7V0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms