RNA–Protein interactions for RNA: ENST00000453951.1

LINC01293-201, Transcript of long intergenic non-protein coding RNA 1293, humanhuman

TSL 1 (best) BASIC

Gene LINC01293, Length 1,266 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01293-201ENST00000453951 NISCHQ9Y2I1 1504 aa45.87■■■■■ 4.93
LINC01293-201ENST00000453951 ABCC9O60706 1549 aa41.51■■■■■ 4.24
LINC01293-201ENST00000453951 CCDC180Q9P1Z9 1646 aa41.36■■■■■ 4.21
LINC01293-201ENST00000453951 RB1CC1Q8TDY2 1594 aa39.49■■■■□ 3.91
LINC01293-201ENST00000453951 NACADO15069 1562 aa39.16■■■■□ 3.86
LINC01293-201ENST00000453951 DNAJC5BQ9UF47 199 aa39.1■■■■□ 3.85
LINC01293-201ENST00000453951 DCAF8L2P0C7V8 631 aa38.78■■■■□ 3.8
LINC01293-201ENST00000453951 PABPN1Q86U42 306 aaKnown RBP eCLIP38.57■■■■□ 3.76
LINC01293-201ENST00000453951 MYO15BQ96JP2 1530 aa38.55■■■■□ 3.76
LINC01293-201ENST00000453951 UNC13AQ9UPW8 1703 aa38.54■■■■□ 3.76
LINC01293-201ENST00000453951 BICRAQ9NZM4 1560 aa38.27■■■■□ 3.72
LINC01293-201ENST00000453951 ZCCHC6Q5VYS8 1495 aaKnown RBP37.97■■■■□ 3.67
LINC01293-201ENST00000453951 DCAF1Q9Y4B6 1507 aa37.94■■■■□ 3.66
LINC01293-201ENST00000453951 SHROOM4Q9ULL8 1493 aa37.87■■■■□ 3.65
LINC01293-201ENST00000453951 SCRIBQ14160 1630 aa37.58■■■■□ 3.61
LINC01293-201ENST00000453951 CC2D2AQ9P2K1 1620 aa37.53■■■■□ 3.6
LINC01293-201ENST00000453951 CECR2Q9BXF3 1484 aa37.46■■■■□ 3.59
LINC01293-201ENST00000453951 EIF4G1Q04637 1599 aaKnown RBP37.38■■■■□ 3.58
LINC01293-201ENST00000453951 DNAJC5Q9H3Z4 198 aa36.21■■■■□ 3.39
LINC01293-201ENST00000453951 NCAPD3P42695 1498 aa36.11■■■■□ 3.37
LINC01293-201ENST00000453951 CUX2O14529 1486 aa35.99■■■■□ 3.35
LINC01293-201ENST00000453951 ATAD2BQ9ULI0 1458 aa35.95■■■■□ 3.35
LINC01293-201ENST00000453951 ERCC6Q03468 1493 aa35.92■■■■□ 3.34
LINC01293-201ENST00000453951 SMARCA2P51531 1590 aa35.89■■■■□ 3.34
LINC01293-201ENST00000453951 SMARCA4P51532 1647 aa35.86■■■■□ 3.33
LINC01293-201ENST00000453951 HMGXB3Q12766 1538 aa35.85■■■■□ 3.33
LINC01293-201ENST00000453951 BAZ1AQ9NRL2 1556 aaPredicted RBP35.67■■■■□ 3.3
LINC01293-201ENST00000453951 BAZ1BQ9UIG0 1483 aaKnown RBP35.6■■■■□ 3.29
LINC01293-201ENST00000453951 NESP48681 1621 aa35.56■■■■□ 3.28
LINC01293-201ENST00000453951 PEG3Q9GZU2 1588 aa35.54■■■■□ 3.28
LINC01293-201ENST00000453951 LAMC3Q9Y6N6 1575 aa35.38■■■■□ 3.25
LINC01293-201ENST00000453951 THOC2Q8NI27 1593 aaKnown RBP35.32■■■■□ 3.24
LINC01293-201ENST00000453951 MROH2BQ7Z745 1585 aa35.3■■■■□ 3.24
LINC01293-201ENST00000453951 PDS5BQ9NTI5 1447 aa35.19■■■■□ 3.22
LINC01293-201ENST00000453951 KIF21AQ7Z4S6 1674 aa35.14■■■■□ 3.22
LINC01293-201ENST00000453951 CADPSQ9ULU8 1353 aa35■■■■□ 3.19
LINC01293-201ENST00000453951 WIZO95785 1651 aa34.87■■■■□ 3.17
LINC01293-201ENST00000453951 MRC2Q9UBG0 1479 aa34.87■■■■□ 3.17
LINC01293-201ENST00000453951 WDR62O43379 1518 aa34.8■■■■□ 3.16
LINC01293-201ENST00000453951 CEP164Q9UPV0 1460 aa34.69■■■■□ 3.14
LINC01293-201ENST00000453951 FANCD2Q9BXW9 1451 aa34.59■■■■□ 3.13
LINC01293-201ENST00000453951 CFTRP13569 1480 aa34.54■■■■□ 3.12
LINC01293-201ENST00000453951 RSF1Q96T23 1441 aaPredicted RBP34.48■■■■□ 3.11
LINC01293-201ENST00000453951 TOP2AP11388 1531 aaKnown RBP34.47■■■■□ 3.11
LINC01293-201ENST00000453951 TRIM41Q8WV44 630 aa34.47■■■■□ 3.11
LINC01293-201ENST00000453951 URB2Q14146 1524 aaKnown RBP34.3■■■■□ 3.08
LINC01293-201ENST00000453951 OSCARQ8IYS5 282 aa34.26■■■■□ 3.08
LINC01293-201ENST00000453951 PRDM2Q13029 1718 aa34.24■■■■□ 3.07
LINC01293-201ENST00000453951 CCDC88BA6NC98 1476 aa34.04■■■■□ 3.04
LINC01293-201ENST00000453951 IFT140Q96RY7 1462 aa34.01■■■■□ 3.04
LINC01293-201ENST00000453951 TOPBP1Q92547 1522 aa33.91■■■■□ 3.02
LINC01293-201ENST00000453951 ABCC8Q09428 1581 aa33.9■■■■□ 3.02
LINC01293-201ENST00000453951 ZNF608Q9ULD9 1512 aaPredicted RBP33.9■■■■□ 3.02
LINC01293-201ENST00000453951 RIMBP3CA6NJZ7 1639 aa33.82■■■■□ 3.01
LINC01293-201ENST00000453951 RIMBP3BA6NNM3 1639 aa33.82■■■■□ 3.01
LINC01293-201ENST00000453951 RIMBP3Q9UFD9 1639 aa33.82■■■■□ 3.01
LINC01293-201ENST00000453951 DNMBPQ6XZF7 1577 aa33.79■■■■□ 3
LINC01293-201ENST00000453951 EIF4G3O43432 1585 aaKnown RBP33.75■■■□□ 2.99
LINC01293-201ENST00000453951 ARHGEF11O15085 1522 aa33.69■■■□□ 2.98
LINC01293-201ENST00000453951 TARBP1Q13395 1621 aaKnown RBP33.62■■■□□ 2.97
LINC01293-201ENST00000453951 AQRO60306 1485 aaKnown RBP eCLIP33.56■■■□□ 2.96
LINC01293-201ENST00000453951 CHD1O14646 1710 aa33.55■■■□□ 2.96
LINC01293-201ENST00000453951 POLA1P09884 1462 aaPredicted RBP33.54■■■□□ 2.96
LINC01293-201ENST00000453951 CYB5RLQ6IPT4 315 aa33.43■■■□□ 2.94
LINC01293-201ENST00000453951 FBLN2P98095 1184 aa33.41■■■□□ 2.94
LINC01293-201ENST00000453951 SOGA1O94964 1423 aa33.38■■■□□ 2.93
LINC01293-201ENST00000453951 WDR97A6NE52 1622 aa33.38■■■□□ 2.93
LINC01293-201ENST00000453951 RAD54L2Q9Y4B4 1467 aa33.37■■■□□ 2.93
LINC01293-201ENST00000453951 ARAP1Q96P48 1450 aa33.33■■■□□ 2.93
LINC01293-201ENST00000453951 TDRD9Q8NDG6 1382 aaKnown RBP33.31■■■□□ 2.92
LINC01293-201ENST00000453951 FGD5Q6ZNL6 1462 aa33.29■■■□□ 2.92
LINC01293-201ENST00000453951 SNAPC4Q5SXM2 1469 aa33.25■■■□□ 2.91
LINC01293-201ENST00000453951 MAGI1Q96QZ7 1491 aaPredicted RBP33.21■■■□□ 2.91
LINC01293-201ENST00000453951 CUX1P39880 1505 aa33.2■■■□□ 2.91
LINC01293-201ENST00000453951 SYNJ1O43426 1573 aa33.17■■■□□ 2.9
LINC01293-201ENST00000453951 CLASP1Q7Z460 1538 aa33.17■■■□□ 2.9
LINC01293-201ENST00000453951 TRHP20396 242 aaPredicted RBP33.16■■■□□ 2.9
LINC01293-201ENST00000453951 CHMP7Q8WUX9 453 aaPredicted RBP33.16■■■□□ 2.9
LINC01293-201ENST00000453951 GRIN2BQ13224 1484 aa33.16■■■□□ 2.9
LINC01293-201ENST00000453951 SYNJ2O15056 1496 aa33.08■■■□□ 2.89
LINC01293-201ENST00000453951 PBRM1Q86U86 1689 aa33.01■■■□□ 2.87
LINC01293-201ENST00000453951 GAPVD1Q14C86 1478 aa32.99■■■□□ 2.87
LINC01293-201ENST00000453951 ABCA10Q8WWZ4 1543 aa32.92■■■□□ 2.86
LINC01293-201ENST00000453951 ABCA5Q8WWZ7 1642 aa32.9■■■□□ 2.86
LINC01293-201ENST00000453951 WRNQ14191 1432 aaPredicted RBP eCLIP32.75■■■□□ 2.83
LINC01293-201ENST00000453951 SUPT5HO00267 1087 aaKnown RBP32.71■■■□□ 2.83
LINC01293-201ENST00000453951 GRIN2AQ12879 1464 aa32.71■■■□□ 2.83
LINC01293-201ENST00000453951 ADAMTS12P58397 1594 aa32.67■■■□□ 2.82
LINC01293-201ENST00000453951 BIVM-ERCC5R4GMW8 1640 aa32.65■■■□□ 2.82
LINC01293-201ENST00000453951 TOP2BQ02880 1626 aa32.63■■■□□ 2.81
LINC01293-201ENST00000453951 NUP160Q12769 1436 aa32.62■■■□□ 2.81
LINC01293-201ENST00000453951 CEP170Q5SW79 1584 aa32.58■■■□□ 2.81
LINC01293-201ENST00000453951 FHAD1B1AJZ9 1412 aa32.58■■■□□ 2.81
LINC01293-201ENST00000453951 ERCC6L2Q5T890 1561 aa32.56■■■□□ 2.8
LINC01293-201ENST00000453951 ERICH3Q5RHP9 1530 aa32.53■■■□□ 2.8
LINC01293-201ENST00000453951 SHROOM2Q13796 1616 aa32.51■■■□□ 2.8
LINC01293-201ENST00000453951 AEBP2Q6ZN18 517 aaPredicted RBP32.45■■■□□ 2.79
LINC01293-201ENST00000453951 PRG4Q92954 1404 aaPredicted RBP32.3■■■□□ 2.76
LINC01293-201ENST00000453951 JPH4Q96JJ6 628 aa32.27■■■□□ 2.76
LINC01293-201ENST00000453951 RUSC2Q8N2Y8 1516 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 197.5 ms