RNA–Protein interactions for RNA: ENST00000511201.2

APBB3-216, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 5 BASIC

Gene APBB3, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-216ENST00000511201 NISCHQ9Y2I1 1504 aa46.03■■■■■ 4.96
APBB3-216ENST00000511201 CCDC180Q9P1Z9 1646 aa41.14■■■■■ 4.18
APBB3-216ENST00000511201 ABCC9O60706 1549 aa40.37■■■■■ 4.05
APBB3-216ENST00000511201 RB1CC1Q8TDY2 1594 aa38.79■■■■□ 3.8
APBB3-216ENST00000511201 NACADO15069 1562 aa38.69■■■■□ 3.78
APBB3-216ENST00000511201 MYO15BQ96JP2 1530 aa38.43■■■■□ 3.74
APBB3-216ENST00000511201 ZCCHC6Q5VYS8 1495 aaKnown RBP38.33■■■■□ 3.73
APBB3-216ENST00000511201 DCAF8L2P0C7V8 631 aa38.25■■■■□ 3.71
APBB3-216ENST00000511201 DCAF1Q9Y4B6 1507 aa38.15■■■■□ 3.7
APBB3-216ENST00000511201 UNC13AQ9UPW8 1703 aa37.94■■■■□ 3.66
APBB3-216ENST00000511201 BICRAQ9NZM4 1560 aa37.68■■■■□ 3.62
APBB3-216ENST00000511201 PABPN1Q86U42 306 aaKnown RBP eCLIP37.58■■■■□ 3.61
APBB3-216ENST00000511201 SCRIBQ14160 1630 aa37.4■■■■□ 3.58
APBB3-216ENST00000511201 SHROOM4Q9ULL8 1493 aa37.33■■■■□ 3.57
APBB3-216ENST00000511201 DNAJC5BQ9UF47 199 aa37.29■■■■□ 3.56
APBB3-216ENST00000511201 EIF4G1Q04637 1599 aaKnown RBP36.68■■■■□ 3.46
APBB3-216ENST00000511201 CC2D2AQ9P2K1 1620 aa36.57■■■■□ 3.44
APBB3-216ENST00000511201 CECR2Q9BXF3 1484 aa36.35■■■■□ 3.41
APBB3-216ENST00000511201 SMARCA4P51532 1647 aa35.8■■■■□ 3.32
APBB3-216ENST00000511201 BAZ1AQ9NRL2 1556 aaPredicted RBP35.7■■■■□ 3.31
APBB3-216ENST00000511201 NCAPD3P42695 1498 aa35.69■■■■□ 3.3
APBB3-216ENST00000511201 ATAD2BQ9ULI0 1458 aa35.65■■■■□ 3.3
APBB3-216ENST00000511201 SMARCA2P51531 1590 aa35.61■■■■□ 3.29
APBB3-216ENST00000511201 HMGXB3Q12766 1538 aa35.55■■■■□ 3.28
APBB3-216ENST00000511201 PEG3Q9GZU2 1588 aa35.52■■■■□ 3.28
APBB3-216ENST00000511201 MROH2BQ7Z745 1585 aa35.44■■■■□ 3.26
APBB3-216ENST00000511201 BAZ1BQ9UIG0 1483 aaKnown RBP35.32■■■■□ 3.24
APBB3-216ENST00000511201 WIZO95785 1651 aa35.04■■■■□ 3.2
APBB3-216ENST00000511201 RSF1Q96T23 1441 aaPredicted RBP34.91■■■■□ 3.18
APBB3-216ENST00000511201 NESP48681 1621 aa34.88■■■■□ 3.17
APBB3-216ENST00000511201 ERCC6Q03468 1493 aa34.82■■■■□ 3.16
APBB3-216ENST00000511201 LAMC3Q9Y6N6 1575 aa34.81■■■■□ 3.16
APBB3-216ENST00000511201 TOP2AP11388 1531 aaKnown RBP34.71■■■■□ 3.15
APBB3-216ENST00000511201 CUX2O14529 1486 aa34.66■■■■□ 3.14
APBB3-216ENST00000511201 CADPSQ9ULU8 1353 aa34.58■■■■□ 3.13
APBB3-216ENST00000511201 THOC2Q8NI27 1593 aaKnown RBP34.53■■■■□ 3.12
APBB3-216ENST00000511201 PDS5BQ9NTI5 1447 aa34.51■■■■□ 3.12
APBB3-216ENST00000511201 KIF21AQ7Z4S6 1674 aa34.5■■■■□ 3.11
APBB3-216ENST00000511201 CFTRP13569 1480 aa34.37■■■■□ 3.09
APBB3-216ENST00000511201 MRC2Q9UBG0 1479 aa34.23■■■■□ 3.07
APBB3-216ENST00000511201 CCDC88BA6NC98 1476 aa34.21■■■■□ 3.07
APBB3-216ENST00000511201 FANCD2Q9BXW9 1451 aa34.2■■■■□ 3.06
APBB3-216ENST00000511201 CEP164Q9UPV0 1460 aa34.2■■■■□ 3.06
APBB3-216ENST00000511201 WDR62O43379 1518 aa34.19■■■■□ 3.06
APBB3-216ENST00000511201 PRDM2Q13029 1718 aa34.14■■■■□ 3.06
APBB3-216ENST00000511201 URB2Q14146 1524 aaKnown RBP33.91■■■■□ 3.02
APBB3-216ENST00000511201 DNAJC5Q9H3Z4 198 aa33.83■■■■□ 3.01
APBB3-216ENST00000511201 TOPBP1Q92547 1522 aa33.63■■■□□ 2.97
APBB3-216ENST00000511201 ABCC8Q09428 1581 aa33.6■■■□□ 2.97
APBB3-216ENST00000511201 DNMBPQ6XZF7 1577 aa33.6■■■□□ 2.97
APBB3-216ENST00000511201 SUPT5HO00267 1087 aaKnown RBP33.58■■■□□ 2.97
APBB3-216ENST00000511201 IFT140Q96RY7 1462 aa33.5■■■□□ 2.95
APBB3-216ENST00000511201 ZNF608Q9ULD9 1512 aaPredicted RBP33.36■■■□□ 2.93
APBB3-216ENST00000511201 TARBP1Q13395 1621 aaKnown RBP33.35■■■□□ 2.93
APBB3-216ENST00000511201 POLA1P09884 1462 aaPredicted RBP33.34■■■□□ 2.93
APBB3-216ENST00000511201 CUX1P39880 1505 aa33.28■■■□□ 2.92
APBB3-216ENST00000511201 EIF4G3O43432 1585 aaKnown RBP33.28■■■□□ 2.92
APBB3-216ENST00000511201 FGD5Q6ZNL6 1462 aa33.2■■■□□ 2.91
APBB3-216ENST00000511201 RAD54L2Q9Y4B4 1467 aa33.14■■■□□ 2.9
APBB3-216ENST00000511201 WDR97A6NE52 1622 aa33.11■■■□□ 2.89
APBB3-216ENST00000511201 SOGA1O94964 1423 aa33.11■■■□□ 2.89
APBB3-216ENST00000511201 AQRO60306 1485 aaKnown RBP eCLIP33.07■■■□□ 2.882e-6■■■■■ 39.8
APBB3-216ENST00000511201 OSCARQ8IYS5 282 aa33■■■□□ 2.87
APBB3-216ENST00000511201 BIVM-ERCC5R4GMW8 1640 aa32.96■■■□□ 2.87
APBB3-216ENST00000511201 TDRD9Q8NDG6 1382 aaKnown RBP32.95■■■□□ 2.86
APBB3-216ENST00000511201 TOP2BQ02880 1626 aa32.94■■■□□ 2.86
APBB3-216ENST00000511201 WRNQ14191 1432 aaPredicted RBP eCLIP32.92■■■□□ 2.86
APBB3-216ENST00000511201 SYNJ1O43426 1573 aa32.91■■■□□ 2.86
APBB3-216ENST00000511201 ABCA10Q8WWZ4 1543 aa32.9■■■□□ 2.86
APBB3-216ENST00000511201 CHD1O14646 1710 aa32.89■■■□□ 2.86
APBB3-216ENST00000511201 ABCA5Q8WWZ7 1642 aa32.84■■■□□ 2.85
APBB3-216ENST00000511201 GRIN2BQ13224 1484 aa32.83■■■□□ 2.85
APBB3-216ENST00000511201 SNAPC4Q5SXM2 1469 aa32.83■■■□□ 2.85
APBB3-216ENST00000511201 MAGI1Q96QZ7 1491 aaPredicted RBP32.8■■■□□ 2.84
APBB3-216ENST00000511201 PBRM1Q86U86 1689 aa32.78■■■□□ 2.84
APBB3-216ENST00000511201 GAPVD1Q14C86 1478 aa32.77■■■□□ 2.84
APBB3-216ENST00000511201 SYNJ2O15056 1496 aa32.67■■■□□ 2.82
APBB3-216ENST00000511201 RIMBP3CA6NJZ7 1639 aa32.65■■■□□ 2.82
APBB3-216ENST00000511201 RIMBP3BA6NNM3 1639 aa32.65■■■□□ 2.82
APBB3-216ENST00000511201 RIMBP3Q9UFD9 1639 aa32.65■■■□□ 2.82
APBB3-216ENST00000511201 ARHGEF11O15085 1522 aa32.61■■■□□ 2.81
APBB3-216ENST00000511201 FBLN2P98095 1184 aa32.59■■■□□ 2.81
APBB3-216ENST00000511201 CLASP1Q7Z460 1538 aa32.58■■■□□ 2.81
APBB3-216ENST00000511201 ADAMTS12P58397 1594 aa32.54■■■□□ 2.8
APBB3-216ENST00000511201 CHMP7Q8WUX9 453 aaPredicted RBP32.52■■■□□ 2.8
APBB3-216ENST00000511201 ERICH3Q5RHP9 1530 aa32.5■■■□□ 2.79
APBB3-216ENST00000511201 TRIM41Q8WV44 630 aa32.47■■■□□ 2.79
APBB3-216ENST00000511201 GRIN2AQ12879 1464 aa32.42■■■□□ 2.78
APBB3-216ENST00000511201 FHAD1B1AJZ9 1412 aa32.4■■■□□ 2.78
APBB3-216ENST00000511201 ARAP1Q96P48 1450 aa32.34■■■□□ 2.77
APBB3-216ENST00000511201 NUP160Q12769 1436 aa32.32■■■□□ 2.76
APBB3-216ENST00000511201 CEP170Q5SW79 1584 aa32.3■■■□□ 2.76
APBB3-216ENST00000511201 KIF27Q86VH2 1401 aa32.24■■■□□ 2.75
APBB3-216ENST00000511201 CUL7Q14999 1698 aa32.16■■■□□ 2.74
APBB3-216ENST00000511201 SHROOM2Q13796 1616 aa32.15■■■□□ 2.74
APBB3-216ENST00000511201 CYB5RLQ6IPT4 315 aa32.14■■■□□ 2.74
APBB3-216ENST00000511201 IGF1RP08069 1367 aa32.13■■■□□ 2.73
APBB3-216ENST00000511201 RUSC2Q8N2Y8 1516 aa32.08■■■□□ 2.73
APBB3-216ENST00000511201 ERCC6L2Q5T890 1561 aa32.04■■■□□ 2.72
APBB3-216ENST00000511201 CARMIL1Q5VZK9 1371 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms