Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 AC123595.1-201ENST00000440769 1046 ntBASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM56-RWDD3S4R434 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 AL591742.1-201ENST00000604433 565 ntBASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
TMEM56-RWDD3S4R434 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
TMEM56-RWDD3S4R434 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.08■□□□□ 0.17
TMEM56-RWDD3S4R434 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
TMEM56-RWDD3S4R434 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.08■□□□□ 0.17
TMEM56-RWDD3S4R434 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
TMEM56-RWDD3S4R434 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
TMEM56-RWDD3S4R434 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM56-RWDD3S4R434 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.08■□□□□ 0.17
TMEM56-RWDD3S4R434 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 AC004854.2-201ENST00000608450 1441 ntBASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 PHGDH-210ENST00000641115 1638 ntBASIC16.08■□□□□ 0.16
TMEM56-RWDD3S4R434 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms