Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.22■□□□□ 0.35
CDH20Q9HBT6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 AC007952.6-201ENST00000573168 2673 ntBASIC17.22■□□□□ 0.35
CDH20Q9HBT6 AC003957.1-201ENST00000625108 2673 ntBASIC17.22■□□□□ 0.35
CDH20Q9HBT6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 POM121L13P-201ENST00000422362 380 ntBASIC17.22■□□□□ 0.35
CDH20Q9HBT6 POU5F1P3-201ENST00000428824 1078 ntBASIC17.22■□□□□ 0.35
CDH20Q9HBT6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH20Q9HBT6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 AC006058.3-201ENST00000606217 1069 ntBASIC17.21■□□□□ 0.35
CDH20Q9HBT6 AL121906.2-201ENST00000621597 723 ntBASIC17.21■□□□□ 0.35
CDH20Q9HBT6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH20Q9HBT6 PHGDH-210ENST00000641115 1638 ntBASIC17.21■□□□□ 0.35
CDH20Q9HBT6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.21■□□□□ 0.34
CDH20Q9HBT6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDH20Q9HBT6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CDH20Q9HBT6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 TSPY20P-201ENST00000450910 630 ntBASIC17.2■□□□□ 0.34
CDH20Q9HBT6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 AC008403.3-201ENST00000598924 454 ntBASIC17.2■□□□□ 0.34
CDH20Q9HBT6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH20Q9HBT6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 PRKY-204ENST00000533551 1019 ntBASIC17.19■□□□□ 0.34
CDH20Q9HBT6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms