Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST4Q8NFU0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST4Q8NFU0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST4Q8NFU0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 AL354811.1-201ENST00000610286 706 ntBASIC16.98■□□□□ 0.31
BEST4Q8NFU0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST4Q8NFU0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BEST4Q8NFU0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 AC096631.2-201ENST00000436136 790 ntBASIC16.96■□□□□ 0.31
BEST4Q8NFU0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 AC106739.1-201ENST00000617035 715 ntBASIC16.96■□□□□ 0.31
BEST4Q8NFU0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST4Q8NFU0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
BEST4Q8NFU0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
BEST4Q8NFU0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
BEST4Q8NFU0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
BEST4Q8NFU0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.96■□□□□ 0.3
BEST4Q8NFU0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.96■□□□□ 0.3
BEST4Q8NFU0 KRT8P36-201ENST00000489121 1440 ntBASIC16.96■□□□□ 0.3
BEST4Q8NFU0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
BEST4Q8NFU0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
BEST4Q8NFU0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 BX119927.1-201ENST00000636596 1552 ntBASIC16.95■□□□□ 0.3
BEST4Q8NFU0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 MIR939-201ENST00000401314 82 ntBASIC16.95■□□□□ 0.3
BEST4Q8NFU0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 AC091305.1-201ENST00000479476 895 ntBASIC16.95■□□□□ 0.3
BEST4Q8NFU0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 AL355001.2-201ENST00000620617 1191 ntBASIC16.95■□□□□ 0.3
BEST4Q8NFU0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 LINC01465-201ENST00000408887 1940 ntBASIC16.95■□□□□ 0.3
BEST4Q8NFU0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
BEST4Q8NFU0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms