Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.96■□□□□ 0.95
LINC00271P0C7V0 AC011558.1-201ENST00000623459 338 ntBASIC20.96■□□□□ 0.95
LINC00271P0C7V0 AC141257.4-201ENST00000634557 245 ntBASIC20.96■□□□□ 0.95
LINC00271P0C7V0 AC136944.6-201ENST00000634818 245 ntBASIC20.96■□□□□ 0.95
LINC00271P0C7V0 AP000550.4-202ENST00000639755 178 ntBASIC20.96■□□□□ 0.95
LINC00271P0C7V0 AF106564.1-201ENST00000607058 2553 ntBASIC20.96■□□□□ 0.95
LINC00271P0C7V0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.96■□□□□ 0.95
LINC00271P0C7V0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.96■□□□□ 0.95
LINC00271P0C7V0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 CCR12P-201ENST00000446203 998 ntBASIC20.95■□□□□ 0.94
LINC00271P0C7V0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.95■□□□□ 0.94
LINC00271P0C7V0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.94■□□□□ 0.94
LINC00271P0C7V0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00271P0C7V0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
LINC00271P0C7V0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00271P0C7V0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00271P0C7V0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.93■□□□□ 0.94
LINC00271P0C7V0 KRT18P56-201ENST00000507275 550 ntBASIC20.93■□□□□ 0.94
LINC00271P0C7V0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.93■□□□□ 0.94
LINC00271P0C7V0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.93■□□□□ 0.94
LINC00271P0C7V0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.93■□□□□ 0.94
LINC00271P0C7V0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.93■□□□□ 0.94
LINC00271P0C7V0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
LINC00271P0C7V0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00271P0C7V0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 KRT126P-201ENST00000549467 1181 ntBASIC20.92■□□□□ 0.94
LINC00271P0C7V0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 TMEM179-206ENST00000616017 1645 ntBASIC20.92■□□□□ 0.94
LINC00271P0C7V0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 AC007225.1-201ENST00000566331 1836 ntBASIC20.92■□□□□ 0.94
LINC00271P0C7V0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00271P0C7V0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.91■□□□□ 0.94
LINC00271P0C7V0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 AC006128.1-201ENST00000624704 1661 ntBASIC20.91■□□□□ 0.94
LINC00271P0C7V0 AL121956.5-201ENST00000625261 221 ntBASIC20.91■□□□□ 0.94
LINC00271P0C7V0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.91■□□□□ 0.94
LINC00271P0C7V0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.9■□□□□ 0.94
LINC00271P0C7V0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 276.7 ms