RNA–Protein interactions for RNA: ENST00000514951.5

SMN1-209, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2 BASIC

Gene SMN1, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-209ENST00000514951 NISCHQ9Y2I1 1504 aa46■■■■■ 4.95
SMN1-209ENST00000514951 CCDC180Q9P1Z9 1646 aa40.75■■■■■ 4.11
SMN1-209ENST00000514951 ABCC9O60706 1549 aa40.07■■■■■ 4.01
SMN1-209ENST00000514951 ZCCHC6Q5VYS8 1495 aaKnown RBP38.42■■■■□ 3.74
SMN1-209ENST00000514951 RB1CC1Q8TDY2 1594 aa38.22■■■■□ 3.71
SMN1-209ENST00000514951 NACADO15069 1562 aa38.19■■■■□ 3.7
SMN1-209ENST00000514951 DCAF8L2P0C7V8 631 aa38.19■■■■□ 3.7
SMN1-209ENST00000514951 MYO15BQ96JP2 1530 aa38.09■■■■□ 3.69
SMN1-209ENST00000514951 DCAF1Q9Y4B6 1507 aa38.08■■■■□ 3.69
SMN1-209ENST00000514951 UNC13AQ9UPW8 1703 aa37.38■■■■□ 3.57
SMN1-209ENST00000514951 PABPN1Q86U42 306 aaKnown RBP eCLIP37.34■■■■□ 3.57
SMN1-209ENST00000514951 DNAJC5BQ9UF47 199 aa37.22■■■■□ 3.55
SMN1-209ENST00000514951 SCRIBQ14160 1630 aa37.21■■■■□ 3.55
SMN1-209ENST00000514951 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
SMN1-209ENST00000514951 SHROOM4Q9ULL8 1493 aa36.62■■■■□ 3.45
SMN1-209ENST00000514951 CC2D2AQ9P2K1 1620 aa36.19■■■■□ 3.38
SMN1-209ENST00000514951 EIF4G1Q04637 1599 aaKnown RBP36.16■■■■□ 3.38
SMN1-209ENST00000514951 CECR2Q9BXF3 1484 aa36.03■■■■□ 3.36
SMN1-209ENST00000514951 SMARCA4P51532 1647 aa35.64■■■■□ 3.3
SMN1-209ENST00000514951 BAZ1AQ9NRL2 1556 aaPredicted RBP35.61■■■■□ 3.29
SMN1-209ENST00000514951 MROH2BQ7Z745 1585 aa35.48■■■■□ 3.27
SMN1-209ENST00000514951 ATAD2BQ9ULI0 1458 aa35.33■■■■□ 3.25
SMN1-209ENST00000514951 PEG3Q9GZU2 1588 aa35.29■■■■□ 3.24
SMN1-209ENST00000514951 SMARCA2P51531 1590 aa35.28■■■■□ 3.24
SMN1-209ENST00000514951 NCAPD3P42695 1498 aa35.23■■■■□ 3.23
SMN1-209ENST00000514951 RSF1Q96T23 1441 aaPredicted RBP35.19■■■■□ 3.22
SMN1-209ENST00000514951 WIZO95785 1651 aa35.13■■■■□ 3.21
SMN1-209ENST00000514951 HMGXB3Q12766 1538 aa35.12■■■■□ 3.21
SMN1-209ENST00000514951 BAZ1BQ9UIG0 1483 aaKnown RBP35.03■■■■□ 3.2
SMN1-209ENST00000514951 TOP2AP11388 1531 aaKnown RBP34.76■■■■□ 3.15
SMN1-209ENST00000514951 ERCC6Q03468 1493 aa34.62■■■■□ 3.13
SMN1-209ENST00000514951 SUPT5HO00267 1087 aaKnown RBP34.53■■■■□ 3.12
SMN1-209ENST00000514951 NESP48681 1621 aa34.47■■■■□ 3.11
SMN1-209ENST00000514951 CUX2O14529 1486 aa34.36■■■■□ 3.09
SMN1-209ENST00000514951 CCDC88BA6NC98 1476 aa34.34■■■■□ 3.09
SMN1-209ENST00000514951 LAMC3Q9Y6N6 1575 aa34.26■■■■□ 3.07
SMN1-209ENST00000514951 CADPSQ9ULU8 1353 aa34.22■■■■□ 3.07
SMN1-209ENST00000514951 CFTRP13569 1480 aa34.11■■■■□ 3.05
SMN1-209ENST00000514951 KIF21AQ7Z4S6 1674 aa34.07■■■■□ 3.05
SMN1-209ENST00000514951 THOC2Q8NI27 1593 aaKnown RBP34.06■■■■□ 3.04
SMN1-209ENST00000514951 PDS5BQ9NTI5 1447 aa34.06■■■■□ 3.04
SMN1-209ENST00000514951 DNAJC5Q9H3Z4 198 aa33.98■■■■□ 3.03
SMN1-209ENST00000514951 PRDM2Q13029 1718 aa33.94■■■■□ 3.02
SMN1-209ENST00000514951 FANCD2Q9BXW9 1451 aa33.84■■■■□ 3.01
SMN1-209ENST00000514951 MRC2Q9UBG0 1479 aa33.75■■■□□ 2.99
SMN1-209ENST00000514951 CEP164Q9UPV0 1460 aa33.75■■■□□ 2.99
SMN1-209ENST00000514951 WDR62O43379 1518 aa33.64■■■□□ 2.98
SMN1-209ENST00000514951 URB2Q14146 1524 aaKnown RBP33.51■■■□□ 2.95
SMN1-209ENST00000514951 TOPBP1Q92547 1522 aa33.36■■■□□ 2.93
SMN1-209ENST00000514951 DNMBPQ6XZF7 1577 aa33.35■■■□□ 2.93
SMN1-209ENST00000514951 ABCC8Q09428 1581 aa33.32■■■□□ 2.92
SMN1-209ENST00000514951 CUX1P39880 1505 aa33.27■■■□□ 2.92
SMN1-209ENST00000514951 WRNQ14191 1432 aaPredicted RBP eCLIP33.15■■■□□ 2.9
SMN1-209ENST00000514951 SYNJ1O43426 1573 aa33.11■■■□□ 2.89
SMN1-209ENST00000514951 POLA1P09884 1462 aaPredicted RBP33.1■■■□□ 2.89
SMN1-209ENST00000514951 BIVM-ERCC5R4GMW8 1640 aa33.08■■■□□ 2.89
SMN1-209ENST00000514951 FGD5Q6ZNL6 1462 aa33.07■■■□□ 2.88
SMN1-209ENST00000514951 TOP2BQ02880 1626 aa33.07■■■□□ 2.88
SMN1-209ENST00000514951 IFT140Q96RY7 1462 aa33.02■■■□□ 2.88
SMN1-209ENST00000514951 TARBP1Q13395 1621 aaKnown RBP32.99■■■□□ 2.87
SMN1-209ENST00000514951 RAD54L2Q9Y4B4 1467 aa32.96■■■□□ 2.87
SMN1-209ENST00000514951 SOGA1O94964 1423 aa32.93■■■□□ 2.86
SMN1-209ENST00000514951 ZNF608Q9ULD9 1512 aaPredicted RBP32.91■■■□□ 2.86
SMN1-209ENST00000514951 OSCARQ8IYS5 282 aa32.84■■■□□ 2.85
SMN1-209ENST00000514951 WDR97A6NE52 1622 aa32.83■■■□□ 2.85
SMN1-209ENST00000514951 EIF4G3O43432 1585 aaKnown RBP32.79■■■□□ 2.84
SMN1-209ENST00000514951 TRIM41Q8WV44 630 aa32.78■■■□□ 2.84
SMN1-209ENST00000514951 ABCA10Q8WWZ4 1543 aa32.77■■■□□ 2.84
SMN1-209ENST00000514951 AQRO60306 1485 aaKnown RBP eCLIP32.72■■■□□ 2.83
SMN1-209ENST00000514951 TDRD9Q8NDG6 1382 aaKnown RBP32.71■■■□□ 2.83
SMN1-209ENST00000514951 ABCA5Q8WWZ7 1642 aa32.64■■■□□ 2.82
SMN1-209ENST00000514951 GAPVD1Q14C86 1478 aa32.57■■■□□ 2.8
SMN1-209ENST00000514951 PBRM1Q86U86 1689 aa32.53■■■□□ 2.8
SMN1-209ENST00000514951 CHD1O14646 1710 aa32.51■■■□□ 2.79
SMN1-209ENST00000514951 GRIN2BQ13224 1484 aa32.51■■■□□ 2.79
SMN1-209ENST00000514951 FBLN2P98095 1184 aa32.48■■■□□ 2.79
SMN1-209ENST00000514951 CHIC1Q5VXU3 224 aa32.48■■■□□ 2.79
SMN1-209ENST00000514951 RIMBP3CA6NJZ7 1639 aa32.44■■■□□ 2.78
SMN1-209ENST00000514951 RIMBP3BA6NNM3 1639 aa32.44■■■□□ 2.78
SMN1-209ENST00000514951 RIMBP3Q9UFD9 1639 aa32.44■■■□□ 2.78
SMN1-209ENST00000514951 SNAPC4Q5SXM2 1469 aa32.43■■■□□ 2.78
SMN1-209ENST00000514951 KIF27Q86VH2 1401 aa32.41■■■□□ 2.78
SMN1-209ENST00000514951 MAGI1Q96QZ7 1491 aaPredicted RBP32.39■■■□□ 2.78
SMN1-209ENST00000514951 ERICH3Q5RHP9 1530 aa32.37■■■□□ 2.77
SMN1-209ENST00000514951 ARHGEF11O15085 1522 aa32.34■■■□□ 2.77
SMN1-209ENST00000514951 RUSC2Q8N2Y8 1516 aa32.29■■■□□ 2.76
SMN1-209ENST00000514951 ADAMTS12P58397 1594 aa32.29■■■□□ 2.76
SMN1-209ENST00000514951 SYNJ2O15056 1496 aa32.27■■■□□ 2.76
SMN1-209ENST00000514951 IGF1RP08069 1367 aa32.26■■■□□ 2.75
SMN1-209ENST00000514951 CHMP7Q8WUX9 453 aaPredicted RBP32.23■■■□□ 2.75
SMN1-209ENST00000514951 FHAD1B1AJZ9 1412 aa32.2■■■□□ 2.75
SMN1-209ENST00000514951 CUL7Q14999 1698 aa32.16■■■□□ 2.74
SMN1-209ENST00000514951 GRIN2AQ12879 1464 aa32.11■■■□□ 2.73
SMN1-209ENST00000514951 CYB5RLQ6IPT4 315 aa32.1■■■□□ 2.73
SMN1-209ENST00000514951 CLASP1Q7Z460 1538 aa32.06■■■□□ 2.72
SMN1-209ENST00000514951 CARMIL1Q5VZK9 1371 aa32.05■■■□□ 2.72
SMN1-209ENST00000514951 ARAP1Q96P48 1450 aa32.04■■■□□ 2.72
SMN1-209ENST00000514951 EEA1Q15075 1411 aa32.03■■■□□ 2.72
SMN1-209ENST00000514951 CEP170Q5SW79 1584 aa31.97■■■□□ 2.71
SMN1-209ENST00000514951 NUP160Q12769 1436 aa31.96■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms