RNA–Protein interactions for RNA: ENST00000225648.3

HOXB6-201, Transcript of homeobox B6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB6, Length 1,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB6-201ENST00000225648 NISCHQ9Y2I1 1504 aa45.85■■■■■ 4.93
HOXB6-201ENST00000225648 CCDC180Q9P1Z9 1646 aa40.55■■■■■ 4.08
HOXB6-201ENST00000225648 ABCC9O60706 1549 aa39.62■■■■□ 3.93
HOXB6-201ENST00000225648 DCAF8L2P0C7V8 631 aa38.28■■■■□ 3.72
HOXB6-201ENST00000225648 ZCCHC6Q5VYS8 1495 aaKnown RBP38.22■■■■□ 3.71
HOXB6-201ENST00000225648 NACADO15069 1562 aa38.16■■■■□ 3.7
HOXB6-201ENST00000225648 RB1CC1Q8TDY2 1594 aa38.12■■■■□ 3.69
HOXB6-201ENST00000225648 MYO15BQ96JP2 1530 aa38.03■■■■□ 3.68
HOXB6-201ENST00000225648 DCAF1Q9Y4B6 1507 aa37.93■■■■□ 3.66
HOXB6-201ENST00000225648 UNC13AQ9UPW8 1703 aa37.19■■■■□ 3.54
HOXB6-201ENST00000225648 PABPN1Q86U42 306 aaKnown RBP eCLIP37.13■■■■□ 3.53
HOXB6-201ENST00000225648 SCRIBQ14160 1630 aa37.07■■■■□ 3.52
HOXB6-201ENST00000225648 BICRAQ9NZM4 1560 aa37.03■■■■□ 3.52
HOXB6-201ENST00000225648 SHROOM4Q9ULL8 1493 aa36.6■■■■□ 3.45
HOXB6-201ENST00000225648 DNAJC5BQ9UF47 199 aa36.33■■■■□ 3.41
HOXB6-201ENST00000225648 EIF4G1Q04637 1599 aaKnown RBP36.01■■■■□ 3.36
HOXB6-201ENST00000225648 CC2D2AQ9P2K1 1620 aa35.8■■■■□ 3.32
HOXB6-201ENST00000225648 CECR2Q9BXF3 1484 aa35.75■■■■□ 3.31
HOXB6-201ENST00000225648 BAZ1AQ9NRL2 1556 aaPredicted RBP35.48■■■■□ 3.27
HOXB6-201ENST00000225648 SMARCA4P51532 1647 aa35.48■■■■□ 3.27
HOXB6-201ENST00000225648 MROH2BQ7Z745 1585 aa35.35■■■■□ 3.25
HOXB6-201ENST00000225648 ATAD2BQ9ULI0 1458 aa35.32■■■■□ 3.24
HOXB6-201ENST00000225648 NCAPD3P42695 1498 aa35.29■■■■□ 3.24
HOXB6-201ENST00000225648 SMARCA2P51531 1590 aa35.21■■■■□ 3.23
HOXB6-201ENST00000225648 PEG3Q9GZU2 1588 aa35.17■■■■□ 3.22
HOXB6-201ENST00000225648 RSF1Q96T23 1441 aaPredicted RBP35.05■■■■□ 3.2
HOXB6-201ENST00000225648 HMGXB3Q12766 1538 aa35.05■■■■□ 3.2
HOXB6-201ENST00000225648 BAZ1BQ9UIG0 1483 aaKnown RBP34.98■■■■□ 3.19
HOXB6-201ENST00000225648 WIZO95785 1651 aa34.92■■■■□ 3.18
HOXB6-201ENST00000225648 TOP2AP11388 1531 aaKnown RBP34.56■■■■□ 3.12
HOXB6-201ENST00000225648 NESP48681 1621 aa34.37■■■■□ 3.09
HOXB6-201ENST00000225648 SUPT5HO00267 1087 aaKnown RBP34.31■■■■□ 3.08
HOXB6-201ENST00000225648 CADPSQ9ULU8 1353 aa34.27■■■■□ 3.08
HOXB6-201ENST00000225648 LAMC3Q9Y6N6 1575 aa34.23■■■■□ 3.07
HOXB6-201ENST00000225648 CCDC88BA6NC98 1476 aa34.23■■■■□ 3.07
HOXB6-201ENST00000225648 CFTRP13569 1480 aa34.1■■■■□ 3.05
HOXB6-201ENST00000225648 ERCC6Q03468 1493 aa34.09■■■■□ 3.05
HOXB6-201ENST00000225648 PDS5BQ9NTI5 1447 aa34.05■■■■□ 3.04
HOXB6-201ENST00000225648 FANCD2Q9BXW9 1451 aa33.83■■■■□ 3.01
HOXB6-201ENST00000225648 KIF21AQ7Z4S6 1674 aa33.83■■■■□ 3.01
HOXB6-201ENST00000225648 CEP164Q9UPV0 1460 aa33.74■■■□□ 2.99
HOXB6-201ENST00000225648 THOC2Q8NI27 1593 aaKnown RBP33.72■■■□□ 2.99
HOXB6-201ENST00000225648 CUX2O14529 1486 aa33.67■■■□□ 2.98
HOXB6-201ENST00000225648 MRC2Q9UBG0 1479 aa33.66■■■□□ 2.98
HOXB6-201ENST00000225648 PRDM2Q13029 1718 aa33.62■■■□□ 2.97
HOXB6-201ENST00000225648 WDR62O43379 1518 aa33.54■■■□□ 2.96
HOXB6-201ENST00000225648 URB2Q14146 1524 aaKnown RBP33.49■■■□□ 2.95
HOXB6-201ENST00000225648 TOPBP1Q92547 1522 aa33.31■■■□□ 2.92
HOXB6-201ENST00000225648 ABCC8Q09428 1581 aa33.29■■■□□ 2.92
HOXB6-201ENST00000225648 DNMBPQ6XZF7 1577 aa33.24■■■□□ 2.91
HOXB6-201ENST00000225648 CUX1P39880 1505 aa33.14■■■□□ 2.9
HOXB6-201ENST00000225648 POLA1P09884 1462 aaPredicted RBP33.05■■■□□ 2.88
HOXB6-201ENST00000225648 IFT140Q96RY7 1462 aa33.04■■■□□ 2.88
HOXB6-201ENST00000225648 WRNQ14191 1432 aaPredicted RBP eCLIP33■■■□□ 2.87
HOXB6-201ENST00000225648 FGD5Q6ZNL6 1462 aa32.98■■■□□ 2.87
HOXB6-201ENST00000225648 SOGA1O94964 1423 aa32.94■■■□□ 2.86
HOXB6-201ENST00000225648 RAD54L2Q9Y4B4 1467 aa32.93■■■□□ 2.86
HOXB6-201ENST00000225648 ZNF608Q9ULD9 1512 aaPredicted RBP32.92■■■□□ 2.86
HOXB6-201ENST00000225648 TARBP1Q13395 1621 aaKnown RBP32.91■■■□□ 2.86
HOXB6-201ENST00000225648 SYNJ1O43426 1573 aa32.88■■■□□ 2.85
HOXB6-201ENST00000225648 TOP2BQ02880 1626 aa32.86■■■□□ 2.85
HOXB6-201ENST00000225648 BIVM-ERCC5R4GMW8 1640 aa32.82■■■□□ 2.84
HOXB6-201ENST00000225648 AQRO60306 1485 aaKnown RBP eCLIP32.77■■■□□ 2.84
HOXB6-201ENST00000225648 TDRD9Q8NDG6 1382 aaKnown RBP32.76■■■□□ 2.84
HOXB6-201ENST00000225648 EIF4G3O43432 1585 aaKnown RBP32.7■■■□□ 2.83
HOXB6-201ENST00000225648 ABCA10Q8WWZ4 1543 aa32.69■■■□□ 2.82
HOXB6-201ENST00000225648 WDR97A6NE52 1622 aa32.62■■■□□ 2.81
HOXB6-201ENST00000225648 GAPVD1Q14C86 1478 aa32.54■■■□□ 2.8
HOXB6-201ENST00000225648 DNAJC5Q9H3Z4 198 aa32.53■■■□□ 2.8
HOXB6-201ENST00000225648 GRIN2BQ13224 1484 aa32.5■■■□□ 2.79
HOXB6-201ENST00000225648 ABCA5Q8WWZ7 1642 aa32.48■■■□□ 2.79
HOXB6-201ENST00000225648 SNAPC4Q5SXM2 1469 aa32.42■■■□□ 2.78
HOXB6-201ENST00000225648 OSCARQ8IYS5 282 aa32.4■■■□□ 2.78
HOXB6-201ENST00000225648 TRIM41Q8WV44 630 aa32.39■■■□□ 2.78
HOXB6-201ENST00000225648 MAGI1Q96QZ7 1491 aaPredicted RBP32.37■■■□□ 2.77
HOXB6-201ENST00000225648 FBLN2P98095 1184 aa32.33■■■□□ 2.77
HOXB6-201ENST00000225648 PBRM1Q86U86 1689 aa32.32■■■□□ 2.76
HOXB6-201ENST00000225648 KIF27Q86VH2 1401 aa32.29■■■□□ 2.76
HOXB6-201ENST00000225648 CHMP7Q8WUX9 453 aaPredicted RBP32.27■■■□□ 2.76
HOXB6-201ENST00000225648 SYNJ2O15056 1496 aa32.27■■■□□ 2.76
HOXB6-201ENST00000225648 ERICH3Q5RHP9 1530 aa32.27■■■□□ 2.76
HOXB6-201ENST00000225648 IGF1RP08069 1367 aa32.22■■■□□ 2.75
HOXB6-201ENST00000225648 CHD1O14646 1710 aa32.2■■■□□ 2.75
HOXB6-201ENST00000225648 FHAD1B1AJZ9 1412 aa32.17■■■□□ 2.74
HOXB6-201ENST00000225648 CHIC1Q5VXU3 224 aa32.17■■■□□ 2.74
HOXB6-201ENST00000225648 ADAMTS12P58397 1594 aa32.15■■■□□ 2.74
HOXB6-201ENST00000225648 RUSC2Q8N2Y8 1516 aa32.11■■■□□ 2.73
HOXB6-201ENST00000225648 GRIN2AQ12879 1464 aa32.08■■■□□ 2.73
HOXB6-201ENST00000225648 CARMIL1Q5VZK9 1371 aa31.99■■■□□ 2.71
HOXB6-201ENST00000225648 NUP160Q12769 1436 aa31.96■■■□□ 2.71
HOXB6-201ENST00000225648 CLASP1Q7Z460 1538 aa31.95■■■□□ 2.71
HOXB6-201ENST00000225648 CUL7Q14999 1698 aa31.94■■■□□ 2.7
HOXB6-201ENST00000225648 CEP170Q5SW79 1584 aa31.89■■■□□ 2.7
HOXB6-201ENST00000225648 ARHGEF11O15085 1522 aa31.81■■■□□ 2.68
HOXB6-201ENST00000225648 CSRNP3Q8WYN3 585 aa31.8■■■□□ 2.68
HOXB6-201ENST00000225648 RAPGEF2Q9Y4G8 1499 aa31.78■■■□□ 2.68
HOXB6-201ENST00000225648 EEA1Q15075 1411 aa31.77■■■□□ 2.68
HOXB6-201ENST00000225648 PRXQ9BXM0 1461 aa31.75■■■□□ 2.67
HOXB6-201ENST00000225648 RIMBP3CA6NJZ7 1639 aa31.74■■■□□ 2.67
HOXB6-201ENST00000225648 RIMBP3BA6NNM3 1639 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms