RNA–Protein interactions for RNA: ENST00000334681.9

CCK-201, Transcript of cholecystokinin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCK, Length 830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCK-201ENST00000334681 NISCHQ9Y2I1 1504 aa45.98■■■■■ 4.95
CCK-201ENST00000334681 CCDC180Q9P1Z9 1646 aa40.96■■■■■ 4.15
CCK-201ENST00000334681 ABCC9O60706 1549 aa40.16■■■■■ 4.02
CCK-201ENST00000334681 RB1CC1Q8TDY2 1594 aa38.62■■■■□ 3.77
CCK-201ENST00000334681 NACADO15069 1562 aa38.56■■■■□ 3.76
CCK-201ENST00000334681 DCAF8L2P0C7V8 631 aa38.43■■■■□ 3.74
CCK-201ENST00000334681 MYO15BQ96JP2 1530 aa38.31■■■■□ 3.72
CCK-201ENST00000334681 ZCCHC6Q5VYS8 1495 aaKnown RBP38.25■■■■□ 3.71
CCK-201ENST00000334681 DCAF1Q9Y4B6 1507 aa38.07■■■■□ 3.69
CCK-201ENST00000334681 UNC13AQ9UPW8 1703 aa37.73■■■■□ 3.63
CCK-201ENST00000334681 PABPN1Q86U42 306 aaKnown RBP eCLIP37.51■■■■□ 3.6
CCK-201ENST00000334681 BICRAQ9NZM4 1560 aa37.45■■■■□ 3.59
CCK-201ENST00000334681 SCRIBQ14160 1630 aa37.28■■■■□ 3.56
CCK-201ENST00000334681 SHROOM4Q9ULL8 1493 aa37.09■■■■□ 3.53
CCK-201ENST00000334681 DNAJC5BQ9UF47 199 aa37.03■■■■□ 3.52
CCK-201ENST00000334681 EIF4G1Q04637 1599 aaKnown RBP36.46■■■■□ 3.43
CCK-201ENST00000334681 CC2D2AQ9P2K1 1620 aa36.35■■■■□ 3.41
CCK-201ENST00000334681 CECR2Q9BXF3 1484 aa36.13■■■■□ 3.37
CCK-201ENST00000334681 SMARCA4P51532 1647 aa35.69■■■■□ 3.3
CCK-201ENST00000334681 BAZ1AQ9NRL2 1556 aaPredicted RBP35.64■■■■□ 3.3
CCK-201ENST00000334681 NCAPD3P42695 1498 aa35.59■■■■□ 3.29
CCK-201ENST00000334681 ATAD2BQ9ULI0 1458 aa35.55■■■■□ 3.28
CCK-201ENST00000334681 SMARCA2P51531 1590 aa35.51■■■■□ 3.28
CCK-201ENST00000334681 MROH2BQ7Z745 1585 aa35.4■■■■□ 3.26
CCK-201ENST00000334681 PEG3Q9GZU2 1588 aa35.38■■■■□ 3.25
CCK-201ENST00000334681 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
CCK-201ENST00000334681 BAZ1BQ9UIG0 1483 aaKnown RBP35.23■■■■□ 3.23
CCK-201ENST00000334681 WIZO95785 1651 aa35.01■■■■□ 3.19
CCK-201ENST00000334681 RSF1Q96T23 1441 aaPredicted RBP34.97■■■■□ 3.19
CCK-201ENST00000334681 NESP48681 1621 aa34.71■■■■□ 3.15
CCK-201ENST00000334681 LAMC3Q9Y6N6 1575 aa34.66■■■■□ 3.14
CCK-201ENST00000334681 TOP2AP11388 1531 aaKnown RBP34.64■■■■□ 3.14
CCK-201ENST00000334681 ERCC6Q03468 1493 aa34.64■■■■□ 3.14
CCK-201ENST00000334681 CADPSQ9ULU8 1353 aa34.52■■■■□ 3.12
CCK-201ENST00000334681 PDS5BQ9NTI5 1447 aa34.44■■■■□ 3.1
CCK-201ENST00000334681 CUX2O14529 1486 aa34.38■■■■□ 3.09
CCK-201ENST00000334681 KIF21AQ7Z4S6 1674 aa34.31■■■■□ 3.08
CCK-201ENST00000334681 CFTRP13569 1480 aa34.29■■■■□ 3.08
CCK-201ENST00000334681 CCDC88BA6NC98 1476 aa34.24■■■■□ 3.07
CCK-201ENST00000334681 THOC2Q8NI27 1593 aaKnown RBP34.23■■■■□ 3.07
CCK-201ENST00000334681 FANCD2Q9BXW9 1451 aa34.11■■■■□ 3.05
CCK-201ENST00000334681 CEP164Q9UPV0 1460 aa34.07■■■■□ 3.05
CCK-201ENST00000334681 MRC2Q9UBG0 1479 aa34.06■■■■□ 3.04
CCK-201ENST00000334681 PRDM2Q13029 1718 aa34.01■■■■□ 3.04
CCK-201ENST00000334681 WDR62O43379 1518 aa33.96■■■■□ 3.03
CCK-201ENST00000334681 SUPT5HO00267 1087 aaKnown RBP33.91■■■■□ 3.02
CCK-201ENST00000334681 URB2Q14146 1524 aaKnown RBP33.77■■■■□ 3
CCK-201ENST00000334681 ABCC8Q09428 1581 aa33.59■■■□□ 2.97
CCK-201ENST00000334681 TOPBP1Q92547 1522 aa33.54■■■□□ 2.96
CCK-201ENST00000334681 DNAJC5Q9H3Z4 198 aa33.52■■■□□ 2.96
CCK-201ENST00000334681 DNMBPQ6XZF7 1577 aa33.49■■■□□ 2.95
CCK-201ENST00000334681 IFT140Q96RY7 1462 aa33.38■■■□□ 2.93
CCK-201ENST00000334681 POLA1P09884 1462 aaPredicted RBP33.25■■■□□ 2.91
CCK-201ENST00000334681 CUX1P39880 1505 aa33.23■■■□□ 2.91
CCK-201ENST00000334681 ZNF608Q9ULD9 1512 aaPredicted RBP33.21■■■□□ 2.91
CCK-201ENST00000334681 TARBP1Q13395 1621 aaKnown RBP33.2■■■□□ 2.91
CCK-201ENST00000334681 FGD5Q6ZNL6 1462 aa33.13■■■□□ 2.89
CCK-201ENST00000334681 SOGA1O94964 1423 aa33.12■■■□□ 2.89
CCK-201ENST00000334681 RAD54L2Q9Y4B4 1467 aa33.08■■■□□ 2.89
CCK-201ENST00000334681 EIF4G3O43432 1585 aaKnown RBP33.07■■■□□ 2.88
CCK-201ENST00000334681 AQRO60306 1485 aaKnown RBP eCLIP33.01■■■□□ 2.88
CCK-201ENST00000334681 WDR97A6NE52 1622 aa32.97■■■□□ 2.87
CCK-201ENST00000334681 WRNQ14191 1432 aaPredicted RBP eCLIP32.96■■■□□ 2.87
CCK-201ENST00000334681 OSCARQ8IYS5 282 aa32.94■■■□□ 2.86
CCK-201ENST00000334681 TDRD9Q8NDG6 1382 aaKnown RBP32.94■■■□□ 2.86
CCK-201ENST00000334681 TOP2BQ02880 1626 aa32.91■■■□□ 2.86
CCK-201ENST00000334681 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
CCK-201ENST00000334681 SYNJ1O43426 1573 aa32.86■■■□□ 2.85
CCK-201ENST00000334681 ABCA10Q8WWZ4 1543 aa32.83■■■□□ 2.85
CCK-201ENST00000334681 GRIN2BQ13224 1484 aa32.75■■■□□ 2.83
CCK-201ENST00000334681 GAPVD1Q14C86 1478 aa32.74■■■□□ 2.83
CCK-201ENST00000334681 CHD1O14646 1710 aa32.7■■■□□ 2.83
CCK-201ENST00000334681 ABCA5Q8WWZ7 1642 aa32.69■■■□□ 2.82
CCK-201ENST00000334681 SNAPC4Q5SXM2 1469 aa32.69■■■□□ 2.82
CCK-201ENST00000334681 MAGI1Q96QZ7 1491 aaPredicted RBP32.69■■■□□ 2.82
CCK-201ENST00000334681 PBRM1Q86U86 1689 aa32.66■■■□□ 2.82
CCK-201ENST00000334681 FBLN2P98095 1184 aa32.64■■■□□ 2.82
CCK-201ENST00000334681 SYNJ2O15056 1496 aa32.56■■■□□ 2.8
CCK-201ENST00000334681 CHMP7Q8WUX9 453 aaPredicted RBP32.56■■■□□ 2.8
CCK-201ENST00000334681 ERICH3Q5RHP9 1530 aa32.45■■■□□ 2.78
CCK-201ENST00000334681 RIMBP3CA6NJZ7 1639 aa32.38■■■□□ 2.77
CCK-201ENST00000334681 RIMBP3BA6NNM3 1639 aa32.38■■■□□ 2.77
CCK-201ENST00000334681 RIMBP3Q9UFD9 1639 aa32.38■■■□□ 2.77
CCK-201ENST00000334681 ADAMTS12P58397 1594 aa32.38■■■□□ 2.77
CCK-201ENST00000334681 ARHGEF11O15085 1522 aa32.36■■■□□ 2.77
CCK-201ENST00000334681 CLASP1Q7Z460 1538 aa32.36■■■□□ 2.77
CCK-201ENST00000334681 FHAD1B1AJZ9 1412 aa32.35■■■□□ 2.77
CCK-201ENST00000334681 GRIN2AQ12879 1464 aa32.32■■■□□ 2.76
CCK-201ENST00000334681 KIF27Q86VH2 1401 aa32.3■■■□□ 2.76
CCK-201ENST00000334681 TRIM41Q8WV44 630 aa32.27■■■□□ 2.76
CCK-201ENST00000334681 IGF1RP08069 1367 aa32.2■■■□□ 2.75
CCK-201ENST00000334681 NUP160Q12769 1436 aa32.2■■■□□ 2.75
CCK-201ENST00000334681 CEP170Q5SW79 1584 aa32.15■■■□□ 2.74
CCK-201ENST00000334681 CUL7Q14999 1698 aa32.11■■■□□ 2.73
CCK-201ENST00000334681 ARAP1Q96P48 1450 aa32.09■■■□□ 2.73
CCK-201ENST00000334681 CYB5RLQ6IPT4 315 aa32.08■■■□□ 2.73
CCK-201ENST00000334681 CARMIL1Q5VZK9 1371 aa32■■■□□ 2.71
CCK-201ENST00000334681 SHROOM2Q13796 1616 aa31.97■■■□□ 2.71
CCK-201ENST00000334681 RUSC2Q8N2Y8 1516 aa31.92■■■□□ 2.7
CCK-201ENST00000334681 JPH4Q96JJ6 628 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms