Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PABPC1P11940 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PABPC1P11940 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PABPC1P11940 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PABPC1P11940 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PABPC1P11940 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PABPC1P11940 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PABPC1P11940 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.22■□□□□ 0.83
PABPC1P11940 AL353807.1-201ENST00000427475 662 ntBASIC20.22■□□□□ 0.83
PABPC1P11940 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.22■□□□□ 0.83
PABPC1P11940 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.22■□□□□ 0.83
PABPC1P11940 AF186192.3-201ENST00000583427 947 ntBASIC20.22■□□□□ 0.83
PABPC1P11940 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.22■□□□□ 0.83
PABPC1P11940 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PABPC1P11940 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PABPC1P11940 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PABPC1P11940 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PABPC1P11940 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PABPC1P11940 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PABPC1P11940 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PABPC1P11940 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PABPC1P11940 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.21■□□□□ 0.83
PABPC1P11940 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.21■□□□□ 0.83
PABPC1P11940 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.21■□□□□ 0.83
PABPC1P11940 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.21■□□□□ 0.83
PABPC1P11940 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.21■□□□□ 0.83
PABPC1P11940 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.21■□□□□ 0.83
PABPC1P11940 AC018553.1-201ENST00000616682 1458 ntBASIC20.21■□□□□ 0.83
PABPC1P11940 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.21■□□□□ 0.83
PABPC1P11940 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.21■□□□□ 0.83
PABPC1P11940 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PABPC1P11940 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PABPC1P11940 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PABPC1P11940 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PABPC1P11940 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.21■□□□□ 0.83
PABPC1P11940 AP006587.1-201ENST00000534129 1502 ntBASIC20.21■□□□□ 0.83
PABPC1P11940 KRT17P2-201ENST00000300992 1314 ntBASIC20.21■□□□□ 0.83
PABPC1P11940 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PABPC1P11940 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PABPC1P11940 TFP1-202ENST00000475455 1573 ntBASIC20.21■□□□□ 0.83
PABPC1P11940 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.2■□□□□ 0.82
PABPC1P11940 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PABPC1P11940 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PABPC1P11940 PHGDH-210ENST00000641115 1638 ntBASIC20.2■□□□□ 0.82
PABPC1P11940 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.2■□□□□ 0.82
PABPC1P11940 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PABPC1P11940 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PABPC1P11940 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PABPC1P11940 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PABPC1P11940 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.2■□□□□ 0.82
PABPC1P11940 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PABPC1P11940 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PABPC1P11940 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PABPC1P11940 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.2■□□□□ 0.82
PABPC1P11940 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.2■□□□□ 0.82
PABPC1P11940 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.2■□□□□ 0.82
PABPC1P11940 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.2■□□□□ 0.82
PABPC1P11940 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PABPC1P11940 MIR4785-201ENST00000585005 73 ntBASIC20.2■□□□□ 0.82
PABPC1P11940 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PABPC1P11940 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.2■□□□□ 0.82
PABPC1P11940 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PABPC1P11940 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.2■□□□□ 0.82
PABPC1P11940 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.2■□□□□ 0.82
PABPC1P11940 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.2■□□□□ 0.82
PABPC1P11940 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.2■□□□□ 0.82
PABPC1P11940 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PABPC1P11940 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.2■□□□□ 0.82
PABPC1P11940 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PABPC1P11940 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PABPC1P11940 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PABPC1P11940 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PABPC1P11940 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PABPC1P11940 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PABPC1P11940 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PABPC1P11940 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PABPC1P11940 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
PABPC1P11940 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.19■□□□□ 0.82
PABPC1P11940 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PABPC1P11940 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.19■□□□□ 0.82
PABPC1P11940 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
PABPC1P11940 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PABPC1P11940 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
PABPC1P11940 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.19■□□□□ 0.82
PABPC1P11940 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.19■□□□□ 0.82
PABPC1P11940 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.19■□□□□ 0.82
PABPC1P11940 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PABPC1P11940 BX119927.1-201ENST00000636596 1552 ntBASIC20.19■□□□□ 0.82
PABPC1P11940 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.19■□□□□ 0.82
PABPC1P11940 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PABPC1P11940 AL391422.3-201ENST00000603791 2761 ntBASIC20.19■□□□□ 0.82
PABPC1P11940 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PABPC1P11940 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.19■□□□□ 0.82
PABPC1P11940 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
PABPC1P11940 AC073314.1-201ENST00000568729 2216 ntBASIC20.19■□□□□ 0.82
PABPC1P11940 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PABPC1P11940 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PABPC1P11940 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.19■□□□□ 0.82
PABPC1P11940 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PABPC1P11940 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms