Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.35□□□□□ -0.11
TRGV1A0A0A0MS02 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 AL691432.2-201ENST00000607222 2038 ntBASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 AC083906.2-201ENST00000511578 360 ntBASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV1A0A0A0MS02 PTBP1P-201ENST00000554374 1601 ntBASIC14.33□□□□□ -0.11
TRGV1A0A0A0MS02 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRGV1A0A0A0MS02 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.33□□□□□ -0.11
TRGV1A0A0A0MS02 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRGV1A0A0A0MS02 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRGV1A0A0A0MS02 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
TRGV1A0A0A0MS02 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRGV1A0A0A0MS02 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
TRGV1A0A0A0MS02 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRGV1A0A0A0MS02 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.33□□□□□ -0.12
TRGV1A0A0A0MS02 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 GPX1P1-201ENST00000388829 606 ntBASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRGV1A0A0A0MS02 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms