Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 RN7SL850P-201ENST00000579959 291 ntBASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 AL445675.2-201ENST00000620291 557 ntBASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SH3TC1Q8TE82 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 TMPOP1-202ENST00000424642 1267 ntBASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 KRT18P16-201ENST00000510337 1294 ntBASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 AL031985.4-201ENST00000642138 673 ntBASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
SH3TC1Q8TE82 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
SH3TC1Q8TE82 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 CYP2D8P-201ENST00000433633 1490 ntBASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 AC026271.3-201ENST00000571884 352 ntBASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
SH3TC1Q8TE82 PHGDH-210ENST00000641115 1638 ntBASIC24.7■■□□□ 1.55
SH3TC1Q8TE82 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SH3TC1Q8TE82 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 AC005363.2-201ENST00000618631 242 ntBASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 LINC01568-207ENST00000641790 1380 ntBASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.7■■□□□ 1.54
SH3TC1Q8TE82 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 MESTP1-201ENST00000404287 994 ntBASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 TUBB8P6-201ENST00000436895 1288 ntBASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 NAPSB-206ENST00000562112 1266 ntBASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 P4HB-223ENST00000576390 439 ntTSL 4 BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 AC010947.1-201ENST00000623454 693 ntBASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.69■■□□□ 1.54
SH3TC1Q8TE82 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.68■■□□□ 1.54
SH3TC1Q8TE82 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SH3TC1Q8TE82 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SH3TC1Q8TE82 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.68■■□□□ 1.54
SH3TC1Q8TE82 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms