Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.33■□□□□ 0.37
CDH20Q9HBT6 AL512408.1-201ENST00000569378 2000 ntBASIC17.33■□□□□ 0.37
CDH20Q9HBT6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH20Q9HBT6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH20Q9HBT6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.33■□□□□ 0.37
CDH20Q9HBT6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH20Q9HBT6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CDH20Q9HBT6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH20Q9HBT6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.33■□□□□ 0.37
CDH20Q9HBT6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 SOX15-203ENST00000570788 1093 ntBASIC17.33■□□□□ 0.36
CDH20Q9HBT6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.33■□□□□ 0.36
CDH20Q9HBT6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.32■□□□□ 0.36
CDH20Q9HBT6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDH20Q9HBT6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 UNC93B5-201ENST00000530315 699 ntBASIC17.31■□□□□ 0.36
CDH20Q9HBT6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CDH20Q9HBT6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.3■□□□□ 0.36
CDH20Q9HBT6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms