Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
KRT78Q8N1N4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 HLA-L-209ENST00000420110 1011 ntBASIC19.15■□□□□ 0.66
KRT78Q8N1N4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
KRT78Q8N1N4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.14■□□□□ 0.66
KRT78Q8N1N4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
KRT78Q8N1N4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT78Q8N1N4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT78Q8N1N4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 ID1-201ENST00000376105 1233 ntBASIC19.14■□□□□ 0.65
KRT78Q8N1N4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 AC005829.2-201ENST00000571422 1056 ntBASIC19.14■□□□□ 0.65
KRT78Q8N1N4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT78Q8N1N4 PCDHAC2-203ENST00000615316 3011 ntBASIC19.14■□□□□ 0.65
KRT78Q8N1N4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 AL355802.2-201ENST00000402069 882 ntBASIC19.13■□□□□ 0.65
KRT78Q8N1N4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 HLA-B-256ENST00000639848 1089 ntBASIC19.13■□□□□ 0.65
KRT78Q8N1N4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 TMEM179-206ENST00000616017 1645 ntBASIC19.13■□□□□ 0.65
KRT78Q8N1N4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.13■□□□□ 0.65
KRT78Q8N1N4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 AC098934.4-201ENST00000564127 592 ntBASIC19.12■□□□□ 0.65
KRT78Q8N1N4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT78Q8N1N4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms