Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.42□□□□□ -0.1
TRGV1A0A0A0MS02 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 AC020763.4-201ENST00000623414 4170 ntBASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 AC133552.2-202ENST00000575694 574 ntBASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.41□□□□□ -0.1
TRGV1A0A0A0MS02 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 KRT17P1-201ENST00000399211 1546 ntBASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV1A0A0A0MS02 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 TCF3P1-201ENST00000423021 1937 ntBASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 AFG3L1P-217ENST00000557444 2447 ntBASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 AC092666.2-201ENST00000613287 246 ntBASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV1A0A0A0MS02 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV1A0A0A0MS02 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms