Protein–RNA interactions for Protein: Q9BZQ2

SHCBP1L, Testicular spindle-associated protein SHCBP1L, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1LQ9BZQ2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.61■□□□□ 0.73
SHCBP1LQ9BZQ2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 AC034268.1-201ENST00000441047 882 ntBASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 MIR6821-201ENST00000617625 74 ntBASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 TMEM179-206ENST00000616017 1645 ntBASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHCBP1LQ9BZQ2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHCBP1LQ9BZQ2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SHCBP1LQ9BZQ2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHCBP1LQ9BZQ2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.58■□□□□ 0.73
SHCBP1LQ9BZQ2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHCBP1LQ9BZQ2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.58■□□□□ 0.73
SHCBP1LQ9BZQ2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHCBP1LQ9BZQ2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SHCBP1LQ9BZQ2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SHCBP1LQ9BZQ2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHCBP1LQ9BZQ2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SHCBP1LQ9BZQ2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.58■□□□□ 0.72
SHCBP1LQ9BZQ2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHCBP1LQ9BZQ2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms