Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.9■■□□□ 1.1
PMS1P54277 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS1P54277 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PMS1P54277 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.89■■□□□ 1.09
PMS1P54277 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.89■■□□□ 1.09
PMS1P54277 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.89■■□□□ 1.09
PMS1P54277 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.89■■□□□ 1.09
PMS1P54277 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 GPX1P1-201ENST00000388829 606 ntBASIC21.89■■□□□ 1.09
PMS1P54277 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.89■■□□□ 1.09
PMS1P54277 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 AC093484.2-201ENST00000580996 2166 ntBASIC21.89■■□□□ 1.09
PMS1P54277 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
PMS1P54277 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PMS1P54277 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PMS1P54277 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.88■■□□□ 1.09
PMS1P54277 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.88■■□□□ 1.09
PMS1P54277 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.88■■□□□ 1.09
PMS1P54277 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PMS1P54277 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PMS1P54277 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PMS1P54277 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
PMS1P54277 LSM12P1-201ENST00000411836 588 ntBASIC21.88■■□□□ 1.09
PMS1P54277 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.88■■□□□ 1.09
PMS1P54277 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PMS1P54277 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PMS1P54277 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.88■■□□□ 1.09
PMS1P54277 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PMS1P54277 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PMS1P54277 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.88■■□□□ 1.09
PMS1P54277 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PMS1P54277 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PMS1P54277 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS1P54277 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS1P54277 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.87■■□□□ 1.09
PMS1P54277 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.87■■□□□ 1.09
PMS1P54277 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS1P54277 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PMS1P54277 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.87■■□□□ 1.09
PMS1P54277 BX276092.2-201ENST00000417668 665 ntBASIC21.87■■□□□ 1.09
PMS1P54277 AC023632.3-201ENST00000521633 145 ntBASIC21.87■■□□□ 1.09
PMS1P54277 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.87■■□□□ 1.09
PMS1P54277 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PMS1P54277 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.87■■□□□ 1.09
PMS1P54277 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS1P54277 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS1P54277 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS1P54277 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS1P54277 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PMS1P54277 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS1P54277 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS1P54277 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PMS1P54277 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PMS1P54277 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PMS1P54277 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PMS1P54277 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.86■■□□□ 1.09
PMS1P54277 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PMS1P54277 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PMS1P54277 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.86■■□□□ 1.09
PMS1P54277 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PMS1P54277 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PMS1P54277 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PMS1P54277 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
PMS1P54277 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS1P54277 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS1P54277 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS1P54277 AC087289.5-201ENST00000586076 3175 ntBASIC21.85■■□□□ 1.09
PMS1P54277 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS1P54277 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.85■■□□□ 1.09
PMS1P54277 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS1P54277 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.85■■□□□ 1.09
PMS1P54277 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS1P54277 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS1P54277 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.85■■□□□ 1.09
PMS1P54277 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.85■■□□□ 1.09
PMS1P54277 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS1P54277 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS1P54277 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PMS1P54277 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS1P54277 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.85■■□□□ 1.09
PMS1P54277 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS1P54277 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
PMS1P54277 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PMS1P54277 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.84■■□□□ 1.09
PMS1P54277 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms