Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A2P08123 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.91■■□□□ 1.1
COL1A2P08123 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.91■■□□□ 1.1
COL1A2P08123 AP003071.4-201ENST00000562276 1284 ntBASIC21.91■■□□□ 1.1
COL1A2P08123 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.91■■□□□ 1.1
COL1A2P08123 REXO1L12P-201ENST00000622156 912 ntBASIC21.91■■□□□ 1.1
COL1A2P08123 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
COL1A2P08123 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.91■■□□□ 1.1
COL1A2P08123 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A2P08123 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A2P08123 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A2P08123 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.91■■□□□ 1.1
COL1A2P08123 SMG8-203ENST00000578922 2178 ntBASIC21.91■■□□□ 1.1
COL1A2P08123 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A2P08123 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A2P08123 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A2P08123 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A2P08123 BX119927.1-201ENST00000636596 1552 ntBASIC21.9■■□□□ 1.1
COL1A2P08123 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A2P08123 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.9■■□□□ 1.1
COL1A2P08123 NUDT16P1-203ENST00000513809 620 ntBASIC21.9■■□□□ 1.1
COL1A2P08123 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.9■■□□□ 1.1
COL1A2P08123 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A2P08123 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A2P08123 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.9■■□□□ 1.1
COL1A2P08123 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A2P08123 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.9■■□□□ 1.1
COL1A2P08123 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A2P08123 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A2P08123 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A2P08123 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.9■■□□□ 1.1
COL1A2P08123 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
COL1A2P08123 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
COL1A2P08123 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
COL1A2P08123 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.89■■□□□ 1.1
COL1A2P08123 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.89■■□□□ 1.1
COL1A2P08123 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.89■■□□□ 1.1
COL1A2P08123 KRT18P16-201ENST00000510337 1294 ntBASIC21.89■■□□□ 1.1
COL1A2P08123 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.89■■□□□ 1.1
COL1A2P08123 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL1A2P08123 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.89■■□□□ 1.1
COL1A2P08123 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL1A2P08123 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL1A2P08123 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.89■■□□□ 1.09
COL1A2P08123 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.89■■□□□ 1.09
COL1A2P08123 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL1A2P08123 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL1A2P08123 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.88■■□□□ 1.09
COL1A2P08123 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A2P08123 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A2P08123 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.88■■□□□ 1.09
COL1A2P08123 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
COL1A2P08123 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.88■■□□□ 1.09
COL1A2P08123 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.88■■□□□ 1.09
COL1A2P08123 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
COL1A2P08123 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.88■■□□□ 1.09
COL1A2P08123 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A2P08123 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
COL1A2P08123 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.88■■□□□ 1.09
COL1A2P08123 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A2P08123 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A2P08123 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.88■■□□□ 1.09
COL1A2P08123 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.87■■□□□ 1.09
COL1A2P08123 TSPY15P-201ENST00000457163 923 ntBASIC21.87■■□□□ 1.09
COL1A2P08123 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.87■■□□□ 1.09
COL1A2P08123 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.87■■□□□ 1.09
COL1A2P08123 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A2P08123 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.87■■□□□ 1.09
COL1A2P08123 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A2P08123 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A2P08123 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A2P08123 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A2P08123 AC007375.3-201ENST00000600936 2314 ntBASIC21.87■■□□□ 1.09
COL1A2P08123 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.87■■□□□ 1.09
COL1A2P08123 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A2P08123 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A2P08123 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.87■■□□□ 1.09
COL1A2P08123 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.87■■□□□ 1.09
COL1A2P08123 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.87■■□□□ 1.09
COL1A2P08123 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.87■■□□□ 1.09
COL1A2P08123 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
COL1A2P08123 AC020907.5-201ENST00000624372 1936 ntBASIC21.86■■□□□ 1.09
COL1A2P08123 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
COL1A2P08123 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.86■■□□□ 1.09
COL1A2P08123 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.86■■□□□ 1.09
COL1A2P08123 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A2P08123 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A2P08123 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A2P08123 KRT16P1-201ENST00000399124 1418 ntBASIC21.86■■□□□ 1.09
COL1A2P08123 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A2P08123 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A2P08123 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
COL1A2P08123 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A2P08123 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A2P08123 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A2P08123 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
COL1A2P08123 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A2P08123 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A2P08123 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.86■■□□□ 1.09
COL1A2P08123 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms