Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 DUSP5P2-201ENST00000426873 1033 ntBASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 AC091874.3-201ENST00000512672 1195 ntBASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 C2orf69P4-201ENST00000565394 541 ntBASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV23-1A0A0A0MS06 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 AC097658.1-201ENST00000475555 843 ntBASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV23-1A0A0A0MS06 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 AC092720.2-201ENST00000602388 1665 ntBASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV23-1A0A0A0MS06 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms