Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 AC091874.3-201ENST00000512672 1195 ntBASIC19.24■□□□□ 0.67
KRT78Q8N1N4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT78Q8N1N4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.23■□□□□ 0.67
KRT78Q8N1N4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 AC097658.1-201ENST00000475555 843 ntBASIC19.23■□□□□ 0.67
KRT78Q8N1N4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT78Q8N1N4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 TCF3P1-201ENST00000423021 1937 ntBASIC19.22■□□□□ 0.67
KRT78Q8N1N4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT78Q8N1N4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 AC112907.3-201ENST00000577781 2400 ntBASIC19.21■□□□□ 0.67
KRT78Q8N1N4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
KRT78Q8N1N4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
KRT78Q8N1N4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
KRT78Q8N1N4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
KRT78Q8N1N4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.66
KRT78Q8N1N4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT78Q8N1N4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms