Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 AL137784.2-201ENST00000607332 1000 ntBASIC20.73■□□□□ 0.91
RFX6Q8HWS3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.73■□□□□ 0.91
RFX6Q8HWS3 KRT17P1-201ENST00000399211 1546 ntBASIC20.73■□□□□ 0.91
RFX6Q8HWS3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX6Q8HWS3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 TMEM179-206ENST00000616017 1645 ntBASIC20.72■□□□□ 0.91
RFX6Q8HWS3 AL512625.2-201ENST00000417533 625 ntBASIC20.72■□□□□ 0.91
RFX6Q8HWS3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RFX6Q8HWS3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX6Q8HWS3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX6Q8HWS3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX6Q8HWS3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX6Q8HWS3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX6Q8HWS3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.71■□□□□ 0.91
RFX6Q8HWS3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.71■□□□□ 0.91
RFX6Q8HWS3 AL031963.3-201ENST00000606441 850 ntBASIC20.71■□□□□ 0.91
RFX6Q8HWS3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX6Q8HWS3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RFX6Q8HWS3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX6Q8HWS3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFX6Q8HWS3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.71■□□□□ 0.91
RFX6Q8HWS3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RFX6Q8HWS3 AC125437.2-201ENST00000625180 2167 ntBASIC20.7■□□□□ 0.91
RFX6Q8HWS3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RFX6Q8HWS3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 CDCA4P2-201ENST00000441182 718 ntBASIC20.7■□□□□ 0.9
RFX6Q8HWS3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.7■□□□□ 0.9
RFX6Q8HWS3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX6Q8HWS3 KRT8P20-201ENST00000423953 1409 ntBASIC20.7■□□□□ 0.9
RFX6Q8HWS3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 C2orf69P4-201ENST00000565394 541 ntBASIC20.69■□□□□ 0.9
RFX6Q8HWS3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX6Q8HWS3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms