Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 snR41snR41 95 nt-3.43□□□□□ -2.96
TRA1P38811 RPL41BYDL133C-A 78 nt-3.43□□□□□ -2.96
TRA1P38811 YLR299C-AYLR299C-A 93 nt-3.45□□□□□ -2.96
TRA1P38811 YLR406C-AYLR406C-A 150 nt-3.45□□□□□ -2.96
TRA1P38811 MPC1YGL080W 393 nt-3.48□□□□□ -2.97
TRA1P38811 YBR178WYBR178W 375 nt-3.5□□□□□ -2.97
TRA1P38811 tM(CAU)Q2tM(CAU)Q2 78 nt-3.52□□□□□ -2.97
TRA1P38811 YJR157WYJR157W 363 nt-3.53□□□□□ -2.97
TRA1P38811 YDL016CYDL016C 303 nt-3.53□□□□□ -2.97
TRA1P38811 YIL115W-AYIL115W-A 372 nt-3.54□□□□□ -2.98
TRA1P38811 YAL016C-BYAL016C-B 186 nt-3.55□□□□□ -2.98
TRA1P38811 YLR163W-AYLR163W-A 114 nt-3.55□□□□□ -2.98
TRA1P38811 YKL106C-AYKL106C-A 120 nt-3.57□□□□□ -2.98
TRA1P38811 YFL019CYFL019C 354 nt-3.6□□□□□ -2.99
TRA1P38811 Q0255Q0255 1419 nt-3.65□□□□□ -2.99
TRA1P38811 YDR413CYDR413C 576 nt-3.7□□□□□ -3
TRA1P38811 CSN9YDR179C 489 nt-3.73□□□□□ -3.01
TRA1P38811 YOR329W-AYOR329W-A 210 nt-3.74□□□□□ -3.01
TRA1P38811 ATP6Q0085 780 nt-3.74□□□□□ -3.01
TRA1P38811 YFL032WYFL032W 321 nt-3.81□□□□□ -3.02
TRA1P38811 RPL41AYDL184C 78 nt-3.81□□□□□ -3.02
TRA1P38811 YOR381W-AYOR381W-A 168 nt-3.82□□□□□ -3.02
TRA1P38811 YBL100W-CYBL100W-C 120 nt-3.84□□□□□ -3.02
TRA1P38811 snR78snR78 87 nt-3.91□□□□□ -3.04
TRA1P38811 YGR035CYGR035C 351 nt-3.99□□□□□ -3.05
TRA1P38811 YLR120W-AYLR120W-A 102 nt-4.02□□□□□ -3.05
TRA1P38811 snR60snR60 104 nt-4.03□□□□□ -3.05
TRA1P38811 snR54snR54 86 nt-4.03□□□□□ -3.05
TRA1P38811 YBR296C-AYBR296C-A 120 nt-4.04□□□□□ -3.06
TRA1P38811 YNL028WYNL028W 318 nt-4.05□□□□□ -3.06
TRA1P38811 YBR109W-AYBR109W-A 225 nt-4.08□□□□□ -3.06
TRA1P38811 YOR102WYOR102W 351 nt-4.09□□□□□ -3.06
TRA1P38811 YLR222C-AYLR222C-A 231 nt-4.13□□□□□ -3.07
TRA1P38811 YEL014CYEL014C 306 nt-4.15□□□□□ -3.07
TRA1P38811 YNL097C-BYNL097C-B 123 nt-4.16□□□□□ -3.08
TRA1P38811 YGL041CYGL041C 204 nt-4.16□□□□□ -3.08
TRA1P38811 tV(UAC)QtV(UAC)Q 76 nt-4.18□□□□□ -3.08
TRA1P38811 YKL118WYKL118W 312 nt-4.22□□□□□ -3.09
TRA1P38811 YNL170WYNL170W 396 nt-4.22□□□□□ -3.09
TRA1P38811 YNL324WYNL324W 396 nt-4.23□□□□□ -3.09
TRA1P38811 YCR095W-AYCR095W-A 159 nt-4.23□□□□□ -3.09
TRA1P38811 YMR001C-AYMR001C-A 231 nt-4.24□□□□□ -3.09
TRA1P38811 snR56snR56 88 nt-4.25□□□□□ -3.09
TRA1P38811 YDR406W-AYDR406W-A 246 nt-4.26□□□□□ -3.09
TRA1P38811 snR85snR85 171 nt-4.27□□□□□ -3.09
TRA1P38811 YER006C-AYER006C-A 318 nt-4.28□□□□□ -3.09
TRA1P38811 YGL188C-AYGL188C-A 141 nt-4.29□□□□□ -3.1
TRA1P38811 snR38snR38 95 nt-4.3□□□□□ -3.1
TRA1P38811 YDR157WYDR157W 402 nt-4.32□□□□□ -3.1
TRA1P38811 YLR434CYLR434C 384 nt-4.32□□□□□ -3.1
TRA1P38811 HTL1YCR020W-B 237 nt-4.33□□□□□ -3.1
TRA1P38811 snR58snR58 96 nt-4.35□□□□□ -3.11
TRA1P38811 YDL114W-AYDL114W-A 114 nt-4.35□□□□□ -3.11
TRA1P38811 GIM4YEL003W 336 nt-4.37□□□□□ -3.11
TRA1P38811 YDR118W-AYDR118W-A 117 nt-4.4□□□□□ -3.11
TRA1P38811 AI5_BETAQ0075 1065 nt-4.41□□□□□ -3.12
TRA1P38811 RPL39YJL189W 156 nt-4.41□□□□□ -3.12
TRA1P38811 YNL122CYNL122C 348 nt-4.42□□□□□ -3.12
TRA1P38811 tL(UAA)QtL(UAA)Q 85 nt-4.43□□□□□ -3.12
TRA1P38811 tW(UCA)QtW(UCA)Q 74 nt-4.47□□□□□ -3.13
TRA1P38811 snR48snR48 113 nt-4.49□□□□□ -3.13
TRA1P38811 tF(GAA)QtF(GAA)Q 75 nt-4.55□□□□□ -3.14
TRA1P38811 YBR131C-AYBR131C-A 90 nt-4.57□□□□□ -3.14
TRA1P38811 snR34snR34 203 nt-4.59□□□□□ -3.14
TRA1P38811 YAL063C-AYAL063C-A 291 nt-4.62□□□□□ -3.15
TRA1P38811 YDL159W-AYDL159W-A 132 nt-4.63□□□□□ -3.15
TRA1P38811 YBL053WYBL053W 375 nt-4.69□□□□□ -3.16
TRA1P38811 YPL038W-AYPL038W-A 192 nt-4.77□□□□□ -3.17
TRA1P38811 snR47snR47 99 nt-4.78□□□□□ -3.17
TRA1P38811 YHL015W-AYHL015W-A 84 nt-4.8□□□□□ -3.18
TRA1P38811 YDR183C-AYDR183C-A 258 nt-4.8□□□□□ -3.18
TRA1P38811 Q0143Q0143 153 nt-4.82□□□□□ -3.18
TRA1P38811 YEL050W-AYEL050W-A 192 nt-4.83□□□□□ -3.18
TRA1P38811 SOM1YEL059C-A 225 nt-4.83□□□□□ -3.18
TRA1P38811 YKL123WYKL123W 381 nt-4.84□□□□□ -3.18
TRA1P38811 YKL096C-BYKL096C-B 150 nt-4.86□□□□□ -3.19
TRA1P38811 YOL164W-AYOL164W-A 183 nt-4.87□□□□□ -3.19
TRA1P38811 YBL071C-BYBL071C-B 99 nt-4.87□□□□□ -3.19
TRA1P38811 YGR151CYGR151C 336 nt-4.98□□□□□ -3.21
TRA1P38811 SPG3YDR504C 384 nt-5□□□□□ -3.21
TRA1P38811 tC(GCA)QtC(GCA)Q 76 nt-5.01□□□□□ -3.21
TRA1P38811 snR52snR52 92 nt-5.05□□□□□ -3.22
TRA1P38811 YGR122C-AYGR122C-A 129 nt-5.08□□□□□ -3.22
TRA1P38811 YKL225WYKL225W 348 nt-5.09□□□□□ -3.22
TRA1P38811 YDR034C-AYDR034C-A 177 nt-5.14□□□□□ -3.23
TRA1P38811 YLR412C-AYLR412C-A 207 nt-5.14□□□□□ -3.23
TRA1P38811 YAL066WYAL066W 309 nt-5.14□□□□□ -3.23
TRA1P38811 YHR175W-AYHR175W-A 150 nt-5.15□□□□□ -3.23
TRA1P38811 YOR302WYOR302W 78 nt-5.27□□□□□ -3.25
TRA1P38811 YAL037C-AYAL037C-A 93 nt-5.33□□□□□ -3.26
TRA1P38811 YJL047C-AYJL047C-A 135 nt-5.35□□□□□ -3.27
TRA1P38811 tS(GCU)Q1tS(GCU)Q1 86 nt-5.4□□□□□ -3.27
TRA1P38811 YOR225WYOR225W 330 nt-5.47□□□□□ -3.28
TRA1P38811 YNL277W-AYNL277W-A 189 nt-5.48□□□□□ -3.29
TRA1P38811 YLR285C-AYLR285C-A 171 nt-5.6□□□□□ -3.31
TRA1P38811 YGL007C-AYGL007C-A 87 nt-5.61□□□□□ -3.31
TRA1P38811 snR40snR40 97 nt-5.61□□□□□ -3.31
TRA1P38811 YPL152W-AYPL152W-A 99 nt-5.82□□□□□ -3.34
TRA1P38811 snR64snR64 101 nt-5.87□□□□□ -3.35
TRA1P38811 YLR294CYLR294C 330 nt-5.9□□□□□ -3.35
Retrieved 100 of 7,029 protein–RNA pairs in 23.7 ms