Protein–RNA interactions for Protein: P38181

NUP170, Nucleoporin NUP170, yeastyeast

Predictions only

Length 1,502 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP170P38181 YDR524C-AYDR524C-A 120 nt-4.91□□□□□ -3.2
NUP170P38181 ATP6Q0085 780 nt-4.93□□□□□ -3.2
NUP170P38181 YHR180C-BYHR180C-B 105 nt-4.93□□□□□ -3.2
NUP170P38181 STE18YJR086W 333 nt-4.97□□□□□ -3.21
NUP170P38181 YOL013W-BYOL013W-B 291 nt-4.97□□□□□ -3.21
NUP170P38181 YOR381W-AYOR381W-A 168 nt-5.01□□□□□ -3.21
NUP170P38181 snR73snR73 106 nt-5.02□□□□□ -3.21
NUP170P38181 YLR299C-AYLR299C-A 93 nt-5.04□□□□□ -3.22
NUP170P38181 YOL038C-AYOL038C-A 96 nt-5.06□□□□□ -3.22
NUP170P38181 YKL106C-AYKL106C-A 120 nt-5.08□□□□□ -3.22
NUP170P38181 snR34snR34 203 nt-5.13□□□□□ -3.23
NUP170P38181 YJL150WYJL150W 303 nt-5.13□□□□□ -3.23
NUP170P38181 YAL016C-BYAL016C-B 186 nt-5.15□□□□□ -3.23
NUP170P38181 snR80snR80 171 nt-5.17□□□□□ -3.24
NUP170P38181 snR60snR60 104 nt-5.18□□□□□ -3.24
NUP170P38181 snR78snR78 87 nt-5.19□□□□□ -3.24
NUP170P38181 YOR335W-AYOR335W-A 81 nt-5.19□□□□□ -3.24
NUP170P38181 YNL198CYNL198C 303 nt-5.2□□□□□ -3.24
NUP170P38181 YNL324WYNL324W 396 nt-5.25□□□□□ -3.25
NUP170P38181 YOR329W-AYOR329W-A 210 nt-5.29□□□□□ -3.26
NUP170P38181 YGL041CYGL041C 204 nt-5.3□□□□□ -3.26
NUP170P38181 YNL028WYNL028W 318 nt-5.3□□□□□ -3.26
NUP170P38181 RPL41BYDL133C-A 78 nt-5.32□□□□□ -3.26
NUP170P38181 snR54snR54 86 nt-5.37□□□□□ -3.27
NUP170P38181 YDR413CYDR413C 576 nt-5.38□□□□□ -3.27
NUP170P38181 YMR001C-AYMR001C-A 231 nt-5.38□□□□□ -3.27
NUP170P38181 YLR120W-AYLR120W-A 102 nt-5.43□□□□□ -3.28
NUP170P38181 BIL1YOR304C-A 231 nt-5.45□□□□□ -3.28
NUP170P38181 YEL014CYEL014C 306 nt-5.46□□□□□ -3.28
NUP170P38181 YLR222C-AYLR222C-A 231 nt-5.47□□□□□ -3.28
NUP170P38181 YLR434CYLR434C 384 nt-5.55□□□□□ -3.3
NUP170P38181 YBR109W-AYBR109W-A 225 nt-5.56□□□□□ -3.3
NUP170P38181 YER006C-AYER006C-A 318 nt-5.58□□□□□ -3.3
NUP170P38181 Q0255Q0255 1419 nt-5.66□□□□□ -3.31
NUP170P38181 YOR102WYOR102W 351 nt-5.69□□□□□ -3.32
NUP170P38181 snR87snR87 109 nt-5.71□□□□□ -3.32
NUP170P38181 HTL1YCR020W-B 237 nt-5.72□□□□□ -3.32
NUP170P38181 tW(UCA)QtW(UCA)Q 74 nt-5.73□□□□□ -3.33
NUP170P38181 YGR035CYGR035C 351 nt-5.87□□□□□ -3.35
NUP170P38181 YBR296C-AYBR296C-A 120 nt-5.93□□□□□ -3.36
NUP170P38181 YGL188C-AYGL188C-A 141 nt-5.94□□□□□ -3.36
NUP170P38181 snR48snR48 113 nt-5.94□□□□□ -3.36
NUP170P38181 YLR412C-AYLR412C-A 207 nt-5.99□□□□□ -3.37
NUP170P38181 RPL41AYDL184C 78 nt-5.99□□□□□ -3.37
NUP170P38181 YKL118WYKL118W 312 nt-6.04□□□□□ -3.38
NUP170P38181 YAL066WYAL066W 309 nt-6.05□□□□□ -3.38
NUP170P38181 YBR131C-AYBR131C-A 90 nt-6.05□□□□□ -3.38
NUP170P38181 YDR406W-AYDR406W-A 246 nt-6.06□□□□□ -3.38
NUP170P38181 snR38snR38 95 nt-6.07□□□□□ -3.38
NUP170P38181 YNL097C-BYNL097C-B 123 nt-6.08□□□□□ -3.38
NUP170P38181 tL(UAA)QtL(UAA)Q 85 nt-6.15□□□□□ -3.39
NUP170P38181 snR56snR56 88 nt-6.18□□□□□ -3.4
NUP170P38181 GIM4YEL003W 336 nt-6.19□□□□□ -3.4
NUP170P38181 tF(GAA)QtF(GAA)Q 75 nt-6.22□□□□□ -3.41
NUP170P38181 snR85snR85 171 nt-6.27□□□□□ -3.41
NUP170P38181 tV(UAC)QtV(UAC)Q 76 nt-6.35□□□□□ -3.43
NUP170P38181 YNL122CYNL122C 348 nt-6.36□□□□□ -3.43
NUP170P38181 YJL136W-AYJL136W-A 84 nt-6.4□□□□□ -3.43
NUP170P38181 YPL038W-AYPL038W-A 192 nt-6.42□□□□□ -3.44
NUP170P38181 YDR183C-AYDR183C-A 258 nt-6.45□□□□□ -3.44
NUP170P38181 YAL063C-AYAL063C-A 291 nt-6.45□□□□□ -3.44
NUP170P38181 YDL114W-AYDL114W-A 114 nt-6.53□□□□□ -3.45
NUP170P38181 RPL39YJL189W 156 nt-6.57□□□□□ -3.46
NUP170P38181 YCR095W-AYCR095W-A 159 nt-6.58□□□□□ -3.46
NUP170P38181 YJL047C-AYJL047C-A 135 nt-6.58□□□□□ -3.46
NUP170P38181 YKL123WYKL123W 381 nt-6.7□□□□□ -3.48
NUP170P38181 snR58snR58 96 nt-6.72□□□□□ -3.49
NUP170P38181 YDR157WYDR157W 402 nt-6.75□□□□□ -3.49
NUP170P38181 YHL015W-AYHL015W-A 84 nt-6.78□□□□□ -3.49
NUP170P38181 YDR118W-AYDR118W-A 117 nt-6.81□□□□□ -3.5
NUP170P38181 YOL164W-AYOL164W-A 183 nt-6.88□□□□□ -3.51
NUP170P38181 YKL096C-BYKL096C-B 150 nt-6.91□□□□□ -3.51
NUP170P38181 YBL071C-BYBL071C-B 99 nt-6.92□□□□□ -3.52
NUP170P38181 SOM1YEL059C-A 225 nt-6.93□□□□□ -3.52
NUP170P38181 snR47snR47 99 nt-7.01□□□□□ -3.53
NUP170P38181 YBL100W-CYBL100W-C 120 nt-7.03□□□□□ -3.54
NUP170P38181 snR52snR52 92 nt-7.03□□□□□ -3.54
NUP170P38181 YBL053WYBL053W 375 nt-7.11□□□□□ -3.55
NUP170P38181 YOR302WYOR302W 78 nt-7.12□□□□□ -3.55
NUP170P38181 YNL277W-AYNL277W-A 189 nt-7.17□□□□□ -3.56
NUP170P38181 SPG3YDR504C 384 nt-7.17□□□□□ -3.56
NUP170P38181 YGR151CYGR151C 336 nt-7.18□□□□□ -3.56
NUP170P38181 YKL225WYKL225W 348 nt-7.22□□□□□ -3.56
NUP170P38181 YLR285C-AYLR285C-A 171 nt-7.22□□□□□ -3.56
NUP170P38181 YHR175W-AYHR175W-A 150 nt-7.26□□□□□ -3.57
NUP170P38181 YDL159W-AYDL159W-A 132 nt-7.32□□□□□ -3.58
NUP170P38181 YNL170WYNL170W 396 nt-7.4□□□□□ -3.59
NUP170P38181 YAL037C-AYAL037C-A 93 nt-7.46□□□□□ -3.6
NUP170P38181 YNR025CYNR025C 360 nt-7.56□□□□□ -3.62
NUP170P38181 tS(GCU)Q1tS(GCU)Q1 86 nt-7.58□□□□□ -3.62
NUP170P38181 YEL050W-AYEL050W-A 192 nt-7.62□□□□□ -3.63
NUP170P38181 YDR034C-AYDR034C-A 177 nt-7.66□□□□□ -3.64
NUP170P38181 YGR122C-AYGR122C-A 129 nt-7.71□□□□□ -3.64
NUP170P38181 tC(GCA)QtC(GCA)Q 76 nt-7.9□□□□□ -3.67
NUP170P38181 YDL240C-AYDL240C-A 138 nt-7.97□□□□□ -3.68
NUP170P38181 YPL152W-AYPL152W-A 99 nt-8.03□□□□□ -3.7
NUP170P38181 YGL007C-AYGL007C-A 87 nt-8.31□□□□□ -3.74
NUP170P38181 snR65snR65 100 nt-8.48□□□□□ -3.77
NUP170P38181 YOR225WYOR225W 330 nt-8.49□□□□□ -3.77
NUP170P38181 YCL001W-BYCL001W-B 255 nt-8.54□□□□□ -3.78
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms