Protein–RNA interactions for Protein: P04050

RPO21, DNA-directed RNA polymerase II subunit RPB1, yeastyeast

Known RBP Predictions only

Length 1,733 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPO21P04050 YJL150WYJL150W 303 nt-2.52□□□□□ -2.81
RPO21P04050 YBR178WYBR178W 375 nt-2.52□□□□□ -2.81
RPO21P04050 YJR157WYJR157W 363 nt-2.53□□□□□ -2.81
RPO21P04050 YPR012WYPR012W 255 nt-2.53□□□□□ -2.81
RPO21P04050 snR41snR41 95 nt-2.53□□□□□ -2.81
RPO21P04050 YLR406C-AYLR406C-A 150 nt-2.54□□□□□ -2.82
RPO21P04050 tM(CAU)Q2tM(CAU)Q2 78 nt-2.54□□□□□ -2.82
RPO21P04050 YFL032WYFL032W 321 nt-2.56□□□□□ -2.82
RPO21P04050 YOR335W-AYOR335W-A 81 nt-2.59□□□□□ -2.82
RPO21P04050 YKL106C-AYKL106C-A 120 nt-2.61□□□□□ -2.83
RPO21P04050 RPL41BYDL133C-A 78 nt-2.62□□□□□ -2.83
RPO21P04050 YLR299C-AYLR299C-A 93 nt-2.62□□□□□ -2.83
RPO21P04050 MPC1YGL080W 393 nt-2.64□□□□□ -2.83
RPO21P04050 ATP6Q0085 780 nt-2.68□□□□□ -2.84
RPO21P04050 YAL016C-BYAL016C-B 186 nt-2.69□□□□□ -2.84
RPO21P04050 BIL1YOR304C-A 231 nt-2.69□□□□□ -2.84
RPO21P04050 YDR413CYDR413C 576 nt-2.72□□□□□ -2.84
RPO21P04050 YOR381W-AYOR381W-A 168 nt-2.72□□□□□ -2.84
RPO21P04050 CSN9YDR179C 489 nt-2.73□□□□□ -2.85
RPO21P04050 snR78snR78 87 nt-2.75□□□□□ -2.85
RPO21P04050 snR87snR87 109 nt-2.75□□□□□ -2.85
RPO21P04050 Q0255Q0255 1419 nt-2.76□□□□□ -2.85
RPO21P04050 YOR329W-AYOR329W-A 210 nt-2.81□□□□□ -2.86
RPO21P04050 snR60snR60 104 nt-2.87□□□□□ -2.87
RPO21P04050 YNL324WYNL324W 396 nt-2.88□□□□□ -2.87
RPO21P04050 YNL028WYNL028W 318 nt-2.89□□□□□ -2.87
RPO21P04050 YBR109W-AYBR109W-A 225 nt-2.89□□□□□ -2.87
RPO21P04050 YGL041CYGL041C 204 nt-2.9□□□□□ -2.87
RPO21P04050 YGR035CYGR035C 351 nt-2.91□□□□□ -2.88
RPO21P04050 YEL014CYEL014C 306 nt-2.93□□□□□ -2.88
RPO21P04050 YLR222C-AYLR222C-A 231 nt-2.94□□□□□ -2.88
RPO21P04050 snR54snR54 86 nt-2.94□□□□□ -2.88
RPO21P04050 YJL136W-AYJL136W-A 84 nt-2.97□□□□□ -2.89
RPO21P04050 YLR434CYLR434C 384 nt-2.99□□□□□ -2.89
RPO21P04050 YOR102WYOR102W 351 nt-2.99□□□□□ -2.89
RPO21P04050 YDR406W-AYDR406W-A 246 nt-3□□□□□ -2.89
RPO21P04050 RPL41AYDL184C 78 nt-3.02□□□□□ -2.89
RPO21P04050 YLR120W-AYLR120W-A 102 nt-3.02□□□□□ -2.89
RPO21P04050 YMR001C-AYMR001C-A 231 nt-3.02□□□□□ -2.89
RPO21P04050 YBR296C-AYBR296C-A 120 nt-3.04□□□□□ -2.9
RPO21P04050 YER006C-AYER006C-A 318 nt-3.07□□□□□ -2.9
RPO21P04050 snR85snR85 171 nt-3.1□□□□□ -2.91
RPO21P04050 YNL097C-BYNL097C-B 123 nt-3.11□□□□□ -2.91
RPO21P04050 snR38snR38 95 nt-3.11□□□□□ -2.91
RPO21P04050 YLR412C-AYLR412C-A 207 nt-3.12□□□□□ -2.91
RPO21P04050 YGL188C-AYGL188C-A 141 nt-3.18□□□□□ -2.92
RPO21P04050 YKL118WYKL118W 312 nt-3.19□□□□□ -2.92
RPO21P04050 HTL1YCR020W-B 237 nt-3.19□□□□□ -2.92
RPO21P04050 tV(UAC)QtV(UAC)Q 76 nt-3.19□□□□□ -2.92
RPO21P04050 GIM4YEL003W 336 nt-3.2□□□□□ -2.92
RPO21P04050 snR58snR58 96 nt-3.21□□□□□ -2.92
RPO21P04050 snR56snR56 88 nt-3.22□□□□□ -2.93
RPO21P04050 snR48snR48 113 nt-3.22□□□□□ -2.93
RPO21P04050 YCR095W-AYCR095W-A 159 nt-3.23□□□□□ -2.93
RPO21P04050 YDR157WYDR157W 402 nt-3.24□□□□□ -2.93
RPO21P04050 tW(UCA)QtW(UCA)Q 74 nt-3.24□□□□□ -2.93
RPO21P04050 YAL066WYAL066W 309 nt-3.24□□□□□ -2.93
RPO21P04050 YBL100W-CYBL100W-C 120 nt-3.24□□□□□ -2.93
RPO21P04050 YDL114W-AYDL114W-A 114 nt-3.26□□□□□ -2.93
RPO21P04050 YBR131C-AYBR131C-A 90 nt-3.3□□□□□ -2.94
RPO21P04050 YDR118W-AYDR118W-A 117 nt-3.31□□□□□ -2.94
RPO21P04050 tL(UAA)QtL(UAA)Q 85 nt-3.31□□□□□ -2.94
RPO21P04050 RPL39YJL189W 156 nt-3.33□□□□□ -2.94
RPO21P04050 YNL122CYNL122C 348 nt-3.37□□□□□ -2.95
RPO21P04050 tF(GAA)QtF(GAA)Q 75 nt-3.42□□□□□ -2.96
RPO21P04050 YNL170WYNL170W 396 nt-3.42□□□□□ -2.96
RPO21P04050 YKL096C-BYKL096C-B 150 nt-3.44□□□□□ -2.96
RPO21P04050 YJL047C-AYJL047C-A 135 nt-3.45□□□□□ -2.96
RPO21P04050 YAL063C-AYAL063C-A 291 nt-3.46□□□□□ -2.96
RPO21P04050 YPL038W-AYPL038W-A 192 nt-3.51□□□□□ -2.97
RPO21P04050 YDL159W-AYDL159W-A 132 nt-3.52□□□□□ -2.97
RPO21P04050 YBL053WYBL053W 375 nt-3.54□□□□□ -2.98
RPO21P04050 YOL164W-AYOL164W-A 183 nt-3.56□□□□□ -2.98
RPO21P04050 snR47snR47 99 nt-3.56□□□□□ -2.98
RPO21P04050 YDR183C-AYDR183C-A 258 nt-3.57□□□□□ -2.98
RPO21P04050 YBL071C-BYBL071C-B 99 nt-3.58□□□□□ -2.98
RPO21P04050 YHL015W-AYHL015W-A 84 nt-3.61□□□□□ -2.99
RPO21P04050 SOM1YEL059C-A 225 nt-3.63□□□□□ -2.99
RPO21P04050 YHR175W-AYHR175W-A 150 nt-3.64□□□□□ -2.99
RPO21P04050 YKL123WYKL123W 381 nt-3.65□□□□□ -2.99
RPO21P04050 SPG3YDR504C 384 nt-3.67□□□□□ -3
RPO21P04050 YKL225WYKL225W 348 nt-3.7□□□□□ -3
RPO21P04050 YGR151CYGR151C 336 nt-3.71□□□□□ -3
RPO21P04050 YEL050W-AYEL050W-A 192 nt-3.72□□□□□ -3
RPO21P04050 snR52snR52 92 nt-3.76□□□□□ -3.01
RPO21P04050 tC(GCA)QtC(GCA)Q 76 nt-3.84□□□□□ -3.02
RPO21P04050 YOR302WYOR302W 78 nt-3.86□□□□□ -3.03
RPO21P04050 YDR034C-AYDR034C-A 177 nt-3.87□□□□□ -3.03
RPO21P04050 YGR122C-AYGR122C-A 129 nt-3.87□□□□□ -3.03
RPO21P04050 tS(GCU)Q1tS(GCU)Q1 86 nt-3.87□□□□□ -3.03
RPO21P04050 YAL037C-AYAL037C-A 93 nt-3.87□□□□□ -3.03
RPO21P04050 YNL277W-AYNL277W-A 189 nt-3.96□□□□□ -3.04
RPO21P04050 YLR285C-AYLR285C-A 171 nt-4□□□□□ -3.05
RPO21P04050 Q0143Q0143 153 nt-4.16□□□□□ -3.08
RPO21P04050 YOR225WYOR225W 330 nt-4.23□□□□□ -3.09
RPO21P04050 snR40snR40 97 nt-4.24□□□□□ -3.09
RPO21P04050 YGL007C-AYGL007C-A 87 nt-4.29□□□□□ -3.1
RPO21P04050 YNR025CYNR025C 360 nt-4.34□□□□□ -3.1
RPO21P04050 YDL240C-AYDL240C-A 138 nt-4.36□□□□□ -3.11
RPO21P04050 YLR294CYLR294C 330 nt-4.39□□□□□ -3.11
Retrieved 100 of 7,029 protein–RNA pairs in 23.9 ms