Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4IP1Q8WWV3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4IP1Q8WWV3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RTN4IP1Q8WWV3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4IP1Q8WWV3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.62■■□□□ 1.05
RTN4IP1Q8WWV3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.62■■□□□ 1.05
RTN4IP1Q8WWV3 AL121749.1-202ENST00000609313 2153 ntBASIC21.62■■□□□ 1.05
RTN4IP1Q8WWV3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RTN4IP1Q8WWV3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4IP1Q8WWV3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.61■■□□□ 1.05
RTN4IP1Q8WWV3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.61■■□□□ 1.05
RTN4IP1Q8WWV3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4IP1Q8WWV3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4IP1Q8WWV3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4IP1Q8WWV3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4IP1Q8WWV3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RTN4IP1Q8WWV3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4IP1Q8WWV3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4IP1Q8WWV3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.59■■□□□ 1.05
RTN4IP1Q8WWV3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.59■■□□□ 1.05
RTN4IP1Q8WWV3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4IP1Q8WWV3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.59■■□□□ 1.05
RTN4IP1Q8WWV3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RTN4IP1Q8WWV3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTN4IP1Q8WWV3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RTN4IP1Q8WWV3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RTN4IP1Q8WWV3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4IP1Q8WWV3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4IP1Q8WWV3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4IP1Q8WWV3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.56■■□□□ 1.04
RTN4IP1Q8WWV3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RTN4IP1Q8WWV3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4IP1Q8WWV3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4IP1Q8WWV3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4IP1Q8WWV3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4IP1Q8WWV3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4IP1Q8WWV3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4IP1Q8WWV3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4IP1Q8WWV3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4IP1Q8WWV3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4IP1Q8WWV3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4IP1Q8WWV3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
RTN4IP1Q8WWV3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4IP1Q8WWV3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4IP1Q8WWV3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4IP1Q8WWV3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4IP1Q8WWV3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RTN4IP1Q8WWV3 SUZ12P1-203ENST00000578195 985 ntBASIC21.53■■□□□ 1.04
RTN4IP1Q8WWV3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4IP1Q8WWV3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.53■■□□□ 1.04
RTN4IP1Q8WWV3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4IP1Q8WWV3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4IP1Q8WWV3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RTN4IP1Q8WWV3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4IP1Q8WWV3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4IP1Q8WWV3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4IP1Q8WWV3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4IP1Q8WWV3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.5■■□□□ 1.03
RTN4IP1Q8WWV3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4IP1Q8WWV3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.5■■□□□ 1.03
RTN4IP1Q8WWV3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4IP1Q8WWV3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4IP1Q8WWV3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4IP1Q8WWV3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4IP1Q8WWV3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.49■■□□□ 1.03
RTN4IP1Q8WWV3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4IP1Q8WWV3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.49■■□□□ 1.03
RTN4IP1Q8WWV3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4IP1Q8WWV3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RTN4IP1Q8WWV3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RTN4IP1Q8WWV3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RTN4IP1Q8WWV3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4IP1Q8WWV3 AC010864.1-201ENST00000609407 1511 ntBASIC21.47■■□□□ 1.03
RTN4IP1Q8WWV3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4IP1Q8WWV3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RTN4IP1Q8WWV3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4IP1Q8WWV3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
RTN4IP1Q8WWV3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.46■■□□□ 1.03
RTN4IP1Q8WWV3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RTN4IP1Q8WWV3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RTN4IP1Q8WWV3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.45■■□□□ 1.02
RTN4IP1Q8WWV3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4IP1Q8WWV3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4IP1Q8WWV3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4IP1Q8WWV3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTN4IP1Q8WWV3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTN4IP1Q8WWV3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.44■■□□□ 1.02
RTN4IP1Q8WWV3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTN4IP1Q8WWV3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RTN4IP1Q8WWV3 MIR762-201ENST00000390236 83 ntBASIC21.43■■□□□ 1.02
RTN4IP1Q8WWV3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RTN4IP1Q8WWV3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTN4IP1Q8WWV3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTN4IP1Q8WWV3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTN4IP1Q8WWV3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTN4IP1Q8WWV3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.42■■□□□ 1.02
RTN4IP1Q8WWV3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTN4IP1Q8WWV3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTN4IP1Q8WWV3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.41■■□□□ 1.02
RTN4IP1Q8WWV3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms