Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
TRIM42Q8IWZ5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TRIM42Q8IWZ5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.69■■□□□ 1.7
TRIM42Q8IWZ5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRIM42Q8IWZ5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.68■■□□□ 1.7
TRIM42Q8IWZ5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.68■■□□□ 1.7
TRIM42Q8IWZ5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.68■■□□□ 1.7
TRIM42Q8IWZ5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.68■■□□□ 1.7
TRIM42Q8IWZ5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRIM42Q8IWZ5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
TRIM42Q8IWZ5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRIM42Q8IWZ5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM42Q8IWZ5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
TRIM42Q8IWZ5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM42Q8IWZ5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM42Q8IWZ5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM42Q8IWZ5 BX255925.1-201ENST00000566954 1854 ntBASIC25.65■■□□□ 1.7
TRIM42Q8IWZ5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM42Q8IWZ5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRIM42Q8IWZ5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRIM42Q8IWZ5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TRIM42Q8IWZ5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM42Q8IWZ5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.63■■□□□ 1.69
TRIM42Q8IWZ5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
TRIM42Q8IWZ5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM42Q8IWZ5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM42Q8IWZ5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM42Q8IWZ5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM42Q8IWZ5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM42Q8IWZ5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM42Q8IWZ5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.61■■□□□ 1.69
TRIM42Q8IWZ5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM42Q8IWZ5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.6■■□□□ 1.69
TRIM42Q8IWZ5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM42Q8IWZ5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.6■■□□□ 1.69
TRIM42Q8IWZ5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM42Q8IWZ5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
TRIM42Q8IWZ5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM42Q8IWZ5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.58■■□□□ 1.69
TRIM42Q8IWZ5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.58■■□□□ 1.69
TRIM42Q8IWZ5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM42Q8IWZ5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.58■■□□□ 1.68
TRIM42Q8IWZ5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM42Q8IWZ5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.57■■□□□ 1.68
TRIM42Q8IWZ5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM42Q8IWZ5 AP004833.2-201ENST00000532228 1454 ntBASIC25.57■■□□□ 1.68
TRIM42Q8IWZ5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM42Q8IWZ5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.57■■□□□ 1.68
TRIM42Q8IWZ5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM42Q8IWZ5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM42Q8IWZ5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
TRIM42Q8IWZ5 AC135731.1-201ENST00000569415 2548 ntBASIC25.56■■□□□ 1.68
TRIM42Q8IWZ5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.55■■□□□ 1.68
TRIM42Q8IWZ5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
TRIM42Q8IWZ5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
TRIM42Q8IWZ5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRIM42Q8IWZ5 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRIM42Q8IWZ5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM42Q8IWZ5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM42Q8IWZ5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM42Q8IWZ5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM42Q8IWZ5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.53■■□□□ 1.68
TRIM42Q8IWZ5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.53■■□□□ 1.68
TRIM42Q8IWZ5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM42Q8IWZ5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM42Q8IWZ5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRIM42Q8IWZ5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRIM42Q8IWZ5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRIM42Q8IWZ5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.51■■□□□ 1.67
TRIM42Q8IWZ5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRIM42Q8IWZ5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TRIM42Q8IWZ5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
TRIM42Q8IWZ5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM42Q8IWZ5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM42Q8IWZ5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.49■■□□□ 1.67
TRIM42Q8IWZ5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
TRIM42Q8IWZ5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.48■■□□□ 1.67
TRIM42Q8IWZ5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TRIM42Q8IWZ5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TRIM42Q8IWZ5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TRIM42Q8IWZ5 AL133380.1-201ENST00000506013 324 ntBASIC25.47■■□□□ 1.67
TRIM42Q8IWZ5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.47■■□□□ 1.67
TRIM42Q8IWZ5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.47■■□□□ 1.67
TRIM42Q8IWZ5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM42Q8IWZ5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.45■■□□□ 1.67
TRIM42Q8IWZ5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM42Q8IWZ5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM42Q8IWZ5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM42Q8IWZ5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM42Q8IWZ5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM42Q8IWZ5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM42Q8IWZ5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM42Q8IWZ5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.43■■□□□ 1.66
TRIM42Q8IWZ5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
TRIM42Q8IWZ5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM42Q8IWZ5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
TRIM42Q8IWZ5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.42■■□□□ 1.66
TRIM42Q8IWZ5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.41■■□□□ 1.66
TRIM42Q8IWZ5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.41■■□□□ 1.66
TRIM42Q8IWZ5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms