Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LINC00242Q5T6M2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00242Q5T6M2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00242Q5T6M2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00242Q5T6M2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00242Q5T6M2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00242Q5T6M2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LINC00242Q5T6M2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00242Q5T6M2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00242Q5T6M2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00242Q5T6M2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LINC00242Q5T6M2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LINC00242Q5T6M2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC00242Q5T6M2 AL133380.1-201ENST00000506013 324 ntBASIC17.68■□□□□ 0.42
LINC00242Q5T6M2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC00242Q5T6M2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC00242Q5T6M2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC00242Q5T6M2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00242Q5T6M2 BX255925.1-201ENST00000566954 1854 ntBASIC17.67■□□□□ 0.42
LINC00242Q5T6M2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00242Q5T6M2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LINC00242Q5T6M2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LINC00242Q5T6M2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC00242Q5T6M2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LINC00242Q5T6M2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LINC00242Q5T6M2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00242Q5T6M2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00242Q5T6M2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00242Q5T6M2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.64■□□□□ 0.41
LINC00242Q5T6M2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00242Q5T6M2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.64■□□□□ 0.41
LINC00242Q5T6M2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00242Q5T6M2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LINC00242Q5T6M2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC00242Q5T6M2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.63■□□□□ 0.41
LINC00242Q5T6M2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC00242Q5T6M2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LINC00242Q5T6M2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.62■□□□□ 0.41
LINC00242Q5T6M2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00242Q5T6M2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC00242Q5T6M2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00242Q5T6M2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00242Q5T6M2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00242Q5T6M2 AP004833.2-201ENST00000532228 1454 ntBASIC17.62■□□□□ 0.41
LINC00242Q5T6M2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LINC00242Q5T6M2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00242Q5T6M2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.61■□□□□ 0.41
LINC00242Q5T6M2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC00242Q5T6M2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00242Q5T6M2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00242Q5T6M2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00242Q5T6M2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00242Q5T6M2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00242Q5T6M2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00242Q5T6M2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00242Q5T6M2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.59■□□□□ 0.41
LINC00242Q5T6M2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC00242Q5T6M2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00242Q5T6M2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.58■□□□□ 0.41
LINC00242Q5T6M2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00242Q5T6M2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00242Q5T6M2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.58■□□□□ 0.4
LINC00242Q5T6M2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LINC00242Q5T6M2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00242Q5T6M2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC00242Q5T6M2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00242Q5T6M2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00242Q5T6M2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC00242Q5T6M2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00242Q5T6M2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00242Q5T6M2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00242Q5T6M2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC00242Q5T6M2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00242Q5T6M2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00242Q5T6M2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00242Q5T6M2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00242Q5T6M2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LINC00242Q5T6M2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00242Q5T6M2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00242Q5T6M2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00242Q5T6M2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00242Q5T6M2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LINC00242Q5T6M2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC00242Q5T6M2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LINC00242Q5T6M2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LINC00242Q5T6M2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
LINC00242Q5T6M2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00242Q5T6M2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00242Q5T6M2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00242Q5T6M2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00242Q5T6M2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LINC00242Q5T6M2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00242Q5T6M2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00242Q5T6M2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LINC00242Q5T6M2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00242Q5T6M2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00242Q5T6M2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00242Q5T6M2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00242Q5T6M2 LINC01003-201ENST00000564834 1764 ntBASIC17.53■□□□□ 0.4
LINC00242Q5T6M2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms