Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.88■□□□□ 0.93
PAX9P55771 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.88■□□□□ 0.93
PAX9P55771 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PAX9P55771 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PAX9P55771 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.87■□□□□ 0.93
PAX9P55771 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PAX9P55771 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PAX9P55771 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PAX9P55771 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PAX9P55771 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PAX9P55771 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PAX9P55771 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PAX9P55771 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PAX9P55771 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PAX9P55771 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PAX9P55771 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PAX9P55771 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PAX9P55771 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PAX9P55771 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
PAX9P55771 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PAX9P55771 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PAX9P55771 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PAX9P55771 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PAX9P55771 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PAX9P55771 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PAX9P55771 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.81■□□□□ 0.92
PAX9P55771 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.81■□□□□ 0.92
PAX9P55771 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.81■□□□□ 0.92
PAX9P55771 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
PAX9P55771 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.8■□□□□ 0.92
PAX9P55771 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.8■□□□□ 0.92
PAX9P55771 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PAX9P55771 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PAX9P55771 AP002365.1-201ENST00000603448 772 ntBASIC20.8■□□□□ 0.92
PAX9P55771 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PAX9P55771 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PAX9P55771 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PAX9P55771 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PAX9P55771 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PAX9P55771 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PAX9P55771 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PAX9P55771 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PAX9P55771 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PAX9P55771 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PAX9P55771 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.76■□□□□ 0.91
PAX9P55771 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAX9P55771 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAX9P55771 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAX9P55771 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.75■□□□□ 0.91
PAX9P55771 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.75■□□□□ 0.91
PAX9P55771 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.75■□□□□ 0.91
PAX9P55771 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PAX9P55771 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAX9P55771 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PAX9P55771 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PAX9P55771 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PAX9P55771 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.74■□□□□ 0.91
PAX9P55771 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAX9P55771 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.73■□□□□ 0.91
PAX9P55771 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAX9P55771 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
PAX9P55771 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.73■□□□□ 0.91
PAX9P55771 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.73■□□□□ 0.91
PAX9P55771 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAX9P55771 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PAX9P55771 AP004833.2-201ENST00000532228 1454 ntBASIC20.72■□□□□ 0.91
PAX9P55771 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.72■□□□□ 0.91
PAX9P55771 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAX9P55771 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAX9P55771 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PAX9P55771 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAX9P55771 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
PAX9P55771 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.7■□□□□ 0.91
PAX9P55771 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PAX9P55771 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PAX9P55771 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PAX9P55771 LINC01003-201ENST00000564834 1764 ntBASIC20.69■□□□□ 0.9
PAX9P55771 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.69■□□□□ 0.9
PAX9P55771 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PAX9P55771 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.69■□□□□ 0.9
PAX9P55771 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PAX9P55771 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.69■□□□□ 0.9
PAX9P55771 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAX9P55771 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
PAX9P55771 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PAX9P55771 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAX9P55771 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAX9P55771 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.67■□□□□ 0.9
PAX9P55771 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PAX9P55771 AL133380.1-201ENST00000506013 324 ntBASIC20.67■□□□□ 0.9
PAX9P55771 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PAX9P55771 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.67■□□□□ 0.9
PAX9P55771 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PAX9P55771 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.67■□□□□ 0.9
PAX9P55771 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PAX9P55771 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PAX9P55771 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PAX9P55771 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.65■□□□□ 0.9
PAX9P55771 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.65■□□□□ 0.9
PAX9P55771 AL449106.1-201ENST00000608517 1980 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms