Protein–RNA interactions for Protein: P53972

RCM1, 25S rRNA (cytosine(2278)-C(5))-methyltransferase, yeastyeast

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RCM1P53972 YFR020WYFR020W 699 nt11.09□□□□□ -0.63
RCM1P53972 EDC2YER035W 438 nt11.08□□□□□ -0.64
RCM1P53972 tL(UAA)B1tL(UAA)B1 84 nt11.08□□□□□ -0.64
RCM1P53972 tL(UAA)B2tL(UAA)B2 84 nt11.08□□□□□ -0.64
RCM1P53972 tL(UAA)DtL(UAA)D 84 nt11.08□□□□□ -0.64
RCM1P53972 SUP51tL(UAA)J 84 nt11.08□□□□□ -0.64
RCM1P53972 tL(UAA)KtL(UAA)K 84 nt11.08□□□□□ -0.64
RCM1P53972 tL(UAA)LtL(UAA)L 84 nt11.08□□□□□ -0.64
RCM1P53972 tL(UAA)NtL(UAA)N 84 nt11.08□□□□□ -0.64
RCM1P53972 CRC1YOR100C 984 nt11.08□□□□□ -0.64
RCM1P53972 HAP5YOR358W 729 nt11.06□□□□□ -0.64
RCM1P53972 SAN1YDR143C 1833 nt11.05□□□□□ -0.64
RCM1P53972 YMR265CYMR265C 1386 nt11.04□□□□□ -0.64
RCM1P53972 UTR5YEL035C 501 nt11.03□□□□□ -0.64
RCM1P53972 LSP1YPL004C 1026 nt11.03□□□□□ -0.64
RCM1P53972 snR31snR31 225 nt11.03□□□□□ -0.64
RCM1P53972 YMR206WYMR206W 942 nt11.01□□□□□ -0.65
RCM1P53972 RIM2YBR192W 1134 nt11.01□□□□□ -0.65
RCM1P53972 ADA2YDR448W 1305 nt11.01□□□□□ -0.65
RCM1P53972 GDH1YOR375C 1365 nt11.01□□□□□ -0.65
RCM1P53972 ARO8YGL202W 1503 nt11□□□□□ -0.65
RCM1P53972 YHR219WYHR219W 1875 nt11□□□□□ -0.65
RCM1P53972 NME1NME1 340 nt10.99□□□□□ -0.65
RCM1P53972 LSR1LSR1 1175 nt10.98□□□□□ -0.65
RCM1P53972 YMR166CYMR166C 1107 nt10.98□□□□□ -0.65
RCM1P53972 YJR149WYJR149W 1215 nt10.97□□□□□ -0.65
RCM1P53972 YPT11YNL304W 1254 nt10.97□□□□□ -0.65
RCM1P53972 GID8YMR135C 1368 nt10.97□□□□□ -0.65
RCM1P53972 KGD2YDR148C 1392 nt10.95□□□□□ -0.66
RCM1P53972 VMA11YPL234C 495 nt10.95□□□□□ -0.66
RCM1P53972 MUP1YGR055W 1725 nt10.94□□□□□ -0.66
RCM1P53972 MRS6YOR370C 1812 nt10.93□□□□□ -0.66
RCM1P53972 HOG1YLR113W 1308 nt10.93□□□□□ -0.66
RCM1P53972 RPN14YGL004C 1254 nt10.93□□□□□ -0.66
RCM1P53972 SPT20YOL148C 1815 nt10.92□□□□□ -0.66
RCM1P53972 ELP4YPL101W 1371 nt10.91□□□□□ -0.66
RCM1P53972 TAD2YJL035C 753 nt10.91□□□□□ -0.66
RCM1P53972 KES1YPL145C 1305 nt10.9□□□□□ -0.66
RCM1P53972 PTC6YCR079W 1329 nt10.89□□□□□ -0.67
RCM1P53972 YER156CYER156C 1017 nt10.89□□□□□ -0.67
RCM1P53972 MFT1YML062C 1179 nt10.89□□□□□ -0.67
RCM1P53972 YKL133CYKL133C 1392 nt10.89□□□□□ -0.67
RCM1P53972 TOS1YBR162C 1368 nt10.89□□□□□ -0.67
RCM1P53972 GAS1YMR307W 1680 nt10.89□□□□□ -0.67
RCM1P53972 CAK1YFL029C 1107 nt10.88□□□□□ -0.67
RCM1P53972 SNX3YOR357C 489 nt10.88□□□□□ -0.67
RCM1P53972 RSM7YJR113C 744 nt10.87□□□□□ -0.67
RCM1P53972 BAP3YDR046C 1815 nt10.86□□□□□ -0.67
RCM1P53972 COQ8YGL119W 1506 nt10.86□□□□□ -0.67
RCM1P53972 RRT14YIL127C 621 nt10.86□□□□□ -0.67
RCM1P53972 ADE1YAR015W 921 nt10.85□□□□□ -0.67
RCM1P53972 ZAP1YJL056C 2643 nt10.84□□□□□ -0.67
RCM1P53972 OCH1YGL038C 1443 nt10.83□□□□□ -0.68
RCM1P53972 SGA1YIL099W 1650 nt10.82□□□□□ -0.68
RCM1P53972 YPL247CYPL247C 1572 nt10.82□□□□□ -0.68
RCM1P53972 SBP1YHL034C 885 nt10.82□□□□□ -0.68
RCM1P53972 RPS6AYPL090C 711 nt10.82□□□□□ -0.68
RCM1P53972 RPS6BYBR181C 711 nt10.82□□□□□ -0.68
RCM1P53972 PRE5YMR314W 705 nt10.81□□□□□ -0.68
RCM1P53972 HOL1YNR055C 1761 nt10.8□□□□□ -0.68
RCM1P53972 BXI1YNL305C 894 nt10.8□□□□□ -0.68
RCM1P53972 MET22YOL064C 1074 nt10.79□□□□□ -0.68
RCM1P53972 RPD3YNL330C 1302 nt10.79□□□□□ -0.68
RCM1P53972 YJL043WYJL043W 774 nt10.78□□□□□ -0.68
RCM1P53972 SDH8YBR269C 417 nt10.77□□□□□ -0.69
RCM1P53972 FUS3YBL016W 1062 nt10.76□□□□□ -0.69
RCM1P53972 YLR460CYLR460C 1131 nt10.75□□□□□ -0.69
RCM1P53972 PET494YNR045W 1470 nt10.74□□□□□ -0.69
RCM1P53972 CMP2YML057W 1815 nt10.74□□□□□ -0.69
RCM1P53972 RNA170RNA170 169 nt10.72□□□□□ -0.69
RCM1P53972 PDC6YGR087C 1692 nt10.71□□□□□ -0.69
RCM1P53972 CHS7YHR142W 951 nt10.71□□□□□ -0.69
RCM1P53972 TDH1YJL052W 999 nt10.71□□□□□ -0.69
RCM1P53972 YPR084WYPR084W 1371 nt10.7□□□□□ -0.7
RCM1P53972 HSL7YBR133C 2484 nt10.69□□□□□ -0.7
RCM1P53972 ATP2YJR121W 1536 nt10.69□□□□□ -0.7
RCM1P53972 NUP53YMR153W 1428 nt10.69□□□□□ -0.7
RCM1P53972 SSL2YIL143C 2532 nt10.65□□□□□ -0.7
RCM1P53972 THI3YDL080C 1830 nt10.65□□□□□ -0.7
RCM1P53972 YMR316C-BYMR316C-B 309 nt10.65□□□□□ -0.7
RCM1P53972 RPC31YNL151C 756 nt10.65□□□□□ -0.7
RCM1P53972 DPL1YDR294C 1770 nt10.65□□□□□ -0.71
RCM1P53972 UGP1YKL035W 1500 nt10.64□□□□□ -0.71
RCM1P53972 YIL168WYIL168W 384 nt10.64□□□□□ -0.71
RCM1P53972 CWP2YKL096W-A 279 nt10.62□□□□□ -0.71
RCM1P53972 OLA1YBR025C 1185 nt10.62□□□□□ -0.71
RCM1P53972 GGA2YHR108W 1758 nt10.6□□□□□ -0.71
RCM1P53972 KRR1YCL059C 951 nt10.57□□□□□ -0.72
RCM1P53972 RHO1YPR165W 630 nt10.57□□□□□ -0.72
RCM1P53972 YPT31YER031C 672 nt10.56□□□□□ -0.72
RCM1P53972 RRT6YGL146C 936 nt10.56□□□□□ -0.72
RCM1P53972 RPR1RPR1 369 nt10.55□□□□□ -0.72
RCM1P53972 SHC1YER096W 1539 nt10.53□□□□□ -0.72
RCM1P53972 GPM1YKL152C 744 nt10.53□□□□□ -0.72
RCM1P53972 ODC1YPL134C 933 nt10.53□□□□□ -0.72
RCM1P53972 HIS2YFR025C 1008 nt10.51□□□□□ -0.73
RCM1P53972 HAC1YFL031W 717 nt10.49□□□□□ -0.73
RCM1P53972 YIR035CYIR035C 765 nt10.49□□□□□ -0.73
RCM1P53972 COS10YNR075W 1125 nt10.49□□□□□ -0.73
RCM1P53972 THI73YLR004C 1572 nt10.48□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms