Protein–RNA interactions for Protein: P53056

YGL260W, Putative UPF0377 protein YGL260W, yeastyeast

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YGL260WP53056 ADE1YAR015W 921 nt7.36□□□□□ -1.23
YGL260WP53056 UTR5YEL035C 501 nt7.35□□□□□ -1.23
YGL260WP53056 YGR139WYGR139W 339 nt7.35□□□□□ -1.23
YGL260WP53056 SFL1YOR140W 2301 nt7.35□□□□□ -1.23
YGL260WP53056 KEL3YPL263C 1956 nt7.35□□□□□ -1.23
YGL260WP53056 LSP1YPL004C 1026 nt7.34□□□□□ -1.23
YGL260WP53056 YPT11YNL304W 1254 nt7.33□□□□□ -1.24
YGL260WP53056 PET494YNR045W 1470 nt7.31□□□□□ -1.24
YGL260WP53056 SRP54YPR088C 1626 nt7.31□□□□□ -1.24
YGL260WP53056 RRT14YIL127C 621 nt7.31□□□□□ -1.24
YGL260WP53056 YJL043WYJL043W 774 nt7.3□□□□□ -1.24
YGL260WP53056 PBP1YGR178C 2169 nt7.3□□□□□ -1.24
YGL260WP53056 MET1YKR069W 1782 nt7.29□□□□□ -1.24
YGL260WP53056 ELO1YJL196C 933 nt7.29□□□□□ -1.24
YGL260WP53056 YJR149WYJR149W 1215 nt7.29□□□□□ -1.24
YGL260WP53056 snR31snR31 225 nt7.29□□□□□ -1.24
YGL260WP53056 NUP53YMR153W 1428 nt7.28□□□□□ -1.24
YGL260WP53056 KGD2YDR148C 1392 nt7.28□□□□□ -1.24
YGL260WP53056 SUV3YPL029W 2214 nt7.27□□□□□ -1.25
YGL260WP53056 YIL100C-AYIL100C-A 339 nt7.27□□□□□ -1.25
YGL260WP53056 RPR1RPR1 369 nt7.27□□□□□ -1.25
YGL260WP53056 YLR046CYLR046C 813 nt7.26□□□□□ -1.25
YGL260WP53056 SAN1YDR143C 1833 nt7.26□□□□□ -1.25
YGL260WP53056 CAK1YFL029C 1107 nt7.25□□□□□ -1.25
YGL260WP53056 YKL053WYKL053W 375 nt7.25□□□□□ -1.25
YGL260WP53056 ALG12YNR030W 1656 nt7.24□□□□□ -1.25
YGL260WP53056 YMR265CYMR265C 1386 nt7.23□□□□□ -1.25
YGL260WP53056 TDH1YJL052W 999 nt7.23□□□□□ -1.25
YGL260WP53056 RSM7YJR113C 744 nt7.23□□□□□ -1.25
YGL260WP53056 COS10YNR075W 1125 nt7.23□□□□□ -1.25
YGL260WP53056 OPI10YOL032W 741 nt7.23□□□□□ -1.25
YGL260WP53056 HAP5YOR358W 729 nt7.23□□□□□ -1.25
YGL260WP53056 CCT2YIL142W 1584 nt7.22□□□□□ -1.25
YGL260WP53056 OCH1YGL038C 1443 nt7.22□□□□□ -1.25
YGL260WP53056 CYT2YKL087C 675 nt7.22□□□□□ -1.25
YGL260WP53056 CRC1YOR100C 984 nt7.21□□□□□ -1.26
YGL260WP53056 ATP2YJR121W 1536 nt7.21□□□□□ -1.26
YGL260WP53056 YPR084WYPR084W 1371 nt7.2□□□□□ -1.26
YGL260WP53056 BXI1YNL305C 894 nt7.2□□□□□ -1.26
YGL260WP53056 YBL095WYBL095W 813 nt7.2□□□□□ -1.26
YGL260WP53056 ITR2YOL103W 1830 nt7.2□□□□□ -1.26
YGL260WP53056 DLD3YEL071W 1491 nt7.19□□□□□ -1.26
YGL260WP53056 RPN14YGL004C 1254 nt7.19□□□□□ -1.26
YGL260WP53056 RPS6AYPL090C 711 nt7.19□□□□□ -1.26
YGL260WP53056 RPS6BYBR181C 711 nt7.19□□□□□ -1.26
YGL260WP53056 ILV3YJR016C 1758 nt7.18□□□□□ -1.26
YGL260WP53056 YDR476CYDR476C 675 nt7.16□□□□□ -1.26
YGL260WP53056 YLR460CYLR460C 1131 nt7.16□□□□□ -1.26
YGL260WP53056 CHS7YHR142W 951 nt7.15□□□□□ -1.26
YGL260WP53056 MET22YOL064C 1074 nt7.15□□□□□ -1.26
YGL260WP53056 GAS1YMR307W 1680 nt7.15□□□□□ -1.27
YGL260WP53056 PDC6YGR087C 1692 nt7.13□□□□□ -1.27
YGL260WP53056 PTC6YCR079W 1329 nt7.13□□□□□ -1.27
YGL260WP53056 PUP2YGR253C 783 nt7.13□□□□□ -1.27
YGL260WP53056 YOR325WYOR325W 474 nt7.13□□□□□ -1.27
YGL260WP53056 VMA11YPL234C 495 nt7.13□□□□□ -1.27
YGL260WP53056 INA1YLR413W 2028 nt7.11□□□□□ -1.27
YGL260WP53056 YHR219WYHR219W 1875 nt7.11□□□□□ -1.27
YGL260WP53056 SBP1YHL034C 885 nt7.1□□□□□ -1.27
YGL260WP53056 DOC1YGL240W 753 nt7.09□□□□□ -1.27
YGL260WP53056 URA1YKL216W 945 nt7.09□□□□□ -1.27
YGL260WP53056 RRT6YGL146C 936 nt7.08□□□□□ -1.28
YGL260WP53056 RNA170RNA170 169 nt7.08□□□□□ -1.28
YGL260WP53056 YLR358CYLR358C 564 nt7.07□□□□□ -1.28
YGL260WP53056 RPC82YPR190C 1965 nt7.07□□□□□ -1.28
YGL260WP53056 PSP2YML017W 1782 nt7.07□□□□□ -1.28
YGL260WP53056 YIL168WYIL168W 384 nt7.06□□□□□ -1.28
YGL260WP53056 LAT1YNL071W 1449 nt7.06□□□□□ -1.28
YGL260WP53056 YAT1YAR035W 2064 nt7.05□□□□□ -1.28
YGL260WP53056 YML079WYML079W 606 nt7.05□□□□□ -1.28
YGL260WP53056 OLA1YBR025C 1185 nt7.05□□□□□ -1.28
YGL260WP53056 PIH1YHR034C 1035 nt7.04□□□□□ -1.28
YGL260WP53056 YJL144WYJL144W 315 nt7.04□□□□□ -1.28
YGL260WP53056 NAR1YNL240C 1476 nt7.04□□□□□ -1.28
YGL260WP53056 SNX3YOR357C 489 nt7.03□□□□□ -1.28
YGL260WP53056 SLM3YDL033C 1254 nt7.02□□□□□ -1.29
YGL260WP53056 YPT31YER031C 672 nt7.02□□□□□ -1.29
YGL260WP53056 HAC1YFL031W 717 nt7.01□□□□□ -1.29
YGL260WP53056 SPG1YGR236C 288 nt7.01□□□□□ -1.29
YGL260WP53056 YOR111WYOR111W 699 nt7.01□□□□□ -1.29
YGL260WP53056 PMU1YKL128C 888 nt7□□□□□ -1.29
YGL260WP53056 CPT1YNL130C 1182 nt7□□□□□ -1.29
YGL260WP53056 LSR1LSR1 1175 nt7□□□□□ -1.29
YGL260WP53056 GID8YMR135C 1368 nt6.98□□□□□ -1.29
YGL260WP53056 ARO8YGL202W 1503 nt6.98□□□□□ -1.29
YGL260WP53056 KRR1YCL059C 951 nt6.98□□□□□ -1.29
YGL260WP53056 YIR035CYIR035C 765 nt6.98□□□□□ -1.29
YGL260WP53056 YMR316C-BYMR316C-B 309 nt6.98□□□□□ -1.29
YGL260WP53056 YRF1-3YGR296W 5580 nt6.97□□□□□ -1.29
YGL260WP53056 YRF1-6YNL339C 5580 nt6.97□□□□□ -1.29
YGL260WP53056 YRF1-7YPL283C 5580 nt6.97□□□□□ -1.29
YGL260WP53056 SRY1YKL218C 981 nt6.97□□□□□ -1.29
YGL260WP53056 RHO1YPR165W 630 nt6.96□□□□□ -1.3
YGL260WP53056 YDR510C-AYDR510C-A 117 nt6.95□□□□□ -1.3
YGL260WP53056 YAL019W-AYAL019W-A 570 nt6.95□□□□□ -1.3
YGL260WP53056 RPD3YNL330C 1302 nt6.95□□□□□ -1.3
YGL260WP53056 PUP3YER094C 618 nt6.94□□□□□ -1.3
YGL260WP53056 YOX1YML027W 1158 nt6.94□□□□□ -1.3
YGL260WP53056 SPR1YOR190W 1338 nt6.94□□□□□ -1.3
YGL260WP53056 MAS2YHR024C 1449 nt6.93□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 56 ms